RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 RRN3Q9NYV6 651 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 PCDHB5Q9Y5E4 795 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TMEM247A6NEH6 219 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 SUPT3HB4E1H0 165 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 SUPT3HO75486 399 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 KLHL2O95198 593 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 ZSCAN5DPP0CG00 497 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 ARF4P18085 180 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-208ENST00000478423 AARSP49588 968 aaKnown RBP eCLIP14.66□□□□□ -0.06
NPHP4-208ENST00000478423 ZNF844Q08AG5 666 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 ZNF662Q6ZS27 426 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 UNC93AQ86WB7 457 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 NLGN2Q8NFZ4 835 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 HTR3CQ8WXA8 447 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 MTBPQ96DY7 904 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 YME1L1Q96TA2 773 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 GDF3Q9NR23 364 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 CD274Q9NZQ7 290 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 CFAP99D6REC4 459 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 NOMO3P69849 1222 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 DNAL1Q4LDG9 190 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 SPDYAQ5MJ70 313 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 ZBTB41Q5SVQ8 909 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 TEDDM1Q5T9Z0 273 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 IFNEQ86WN2 208 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 SEMA4DQ92854 862 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 MFSD14AQ96MC6 490 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 NUDT5Q9UKK9 219 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 USP2O75604 605 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-208ENST00000478423 MYO1DO94832 1006 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 LTFP02788 710 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 CYP1A2P05177 515 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 KDELR1P24390 212 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 GLRBP48167 497 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 PHEXP78562 749 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 MPP3Q13368 585 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 STRA8Q7Z7C7 330 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 LONP2Q86WA8 852 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 FAM136AQ96C01 138 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 FAM167BQ9BTA0 163 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 SHCBP1LQ9BZQ2 653 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 RNPEPQ9H4A4 650 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 HMX1Q9NP08 348 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-208ENST00000478423 IARS2Q9NSE4 1012 aaKnown RBP14.66□□□□□ -0.06
NPHP4-208ENST00000478423 THEGQ9P2T0 379 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 ATP11BQ9Y2G3 1177 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 UMODL1Q5DID0 1318 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 TBKBP1A7MCY6 615 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 ZNF862O60290 1169 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 PYGBP11216 843 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 MAP4P27816 1152 aaKnown RBP14.66□□□□□ -0.06
NPHP4-208ENST00000478423 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.66□□□□□ -0.06
NPHP4-208ENST00000478423 TMC7Q7Z402 723 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 KREMEN1Q96MU8 473 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 MYCBPQ99417 103 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-208ENST00000478423 ELOVL4Q9GZR5 314 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 FBXO44Q9H4M3 255 aa14.66□□□□□ -0.06
NPHP4-208ENST00000478423 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 PTPN1P18031 435 aaKnown RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 DAB2IPQ5VWQ8 1189 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 ICE2Q659A1 982 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 CLEC4DQ8WXI8 215 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 BSNDQ8WZ55 320 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 CMTM5Q96DZ9 223 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 FICDQ9BVA6 458 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 PDGFDQ9GZP0 370 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 ANLNQ9NQW6 1124 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 CRLS1Q9UJA2 301 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 PCDHGB4Q9UN71 923 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 C2CD2Q9Y426 696 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 SUPT7LO94864 414 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 EGFRP00533 1210 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 HOXC6P09630 235 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 RBL1P28749 1068 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 PTPN7P35236 360 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 SKIV2LQ15477 1246 aaKnown RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 MARC1Q5VT66 337 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 ST13P4Q8IZP2 240 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 PRELID2Q8N945 189 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 KAT2BQ92831 832 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 GPR20Q99678 358 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 MRPL1Q9BYD6 325 aaKnown RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 ILKAPQ9H0C8 392 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 HEY2Q9UBP5 337 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 MRPL42Q9Y6G3 142 aaKnown RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 EIF4E1BA6NMX2 242 aaKnown RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 C2orf81A6NN90 581 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 AVPR1AP37288 418 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 ARHGDIAP52565 204 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 OXCT1P55809 520 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 IFI35P80217 286 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 POU6F1Q14863 301 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 NLRP9Q7RTR0 991 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 PIGZQ86VD9 579 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 MRPL46Q9H2W6 279 aaKnown RBP14.65□□□□□ -0.06
NPHP4-208ENST00000478423 POPDC2Q9HBU9 364 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 NINJ2Q9NZG7 142 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 VANGL2Q9ULK5 521 aa14.65□□□□□ -0.06
NPHP4-208ENST00000478423 O00370 1275 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 ZBTB22O15209 634 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms