RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 RSRC1Q96IZ7 334 aaKnown RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 PRMT1Q99873 361 aaKnown RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 TRIM55Q9BYV6 548 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 VANGL2Q9ULK5 521 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 COQ4Q9Y3A0 265 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 O00370 1275 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 MAP2K7O14733 419 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 ATG7O95352 703 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 VNN1O95497 513 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 AMHP03971 560 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 RBL1P28749 1068 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 CCND3P30281 292 aaPredicted RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 DCLRE1AQ6PJP8 1040 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 YAF2Q8IY57 180 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 KATNAL2Q8IYT4 538 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 COLGALT1Q8NBJ5 622 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 HES6Q96HZ4 224 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 CDHR5Q9HBB8 845 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 RBM22Q9NW64 420 aaKnown RBP eCLIP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 PSMC3IPQ9P2W1 217 aaPredicted RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 MID2Q9UJV3 735 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 COG5Q9UP83 839 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 TCP11X1B4DZS4 312 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 NFKBIAP25963 317 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 NAPEPLDQ6IQ20 393 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 LRRC6Q86X45 466 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 PRELID2Q8N945 189 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 ATAD1Q8NBU5 361 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 TACO1Q9BSH4 297 aaKnown RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 SNRNP25Q9BV90 132 aaKnown RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 PPARGC1AQ9UBK2 798 aaKnown RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 TMEM120BA0PK00 339 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 LMO2P25791 158 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 AVPR1AP37288 418 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 HSPA9P38646 679 aaKnown RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 MDH1P40925 334 aaKnown RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 GRIK3Q13003 919 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 USP10Q14694 798 aaKnown RBP12.26□□□□□ -0.45
SGSM3-209ENST00000478085 LRIG3Q6UXM1 1119 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 SCLYQ96I15 445 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 ATXN3LQ9H3M9 355 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 WHRNQ9P202 907 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 OR12D3Q9UGF7 316 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 GGT7Q9UJ14 662 aa12.26□□□□□ -0.45
SGSM3-209ENST00000478085 TMEM191CA6NGB0 347 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 CBX4O00257 560 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 FGFR1P11362 822 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 SELPP16109 830 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 FLT3P36888 993 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 ZNF662Q6ZS27 426 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 CARNMT1Q8N4J0 409 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 PDCD7Q8N8D1 485 aaKnown RBP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 CFAP61Q8NHU2 1237 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 BLOC1S5Q8TDH9 187 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 CHMP6Q96FZ7 201 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 XAB2Q9HCS7 855 aaKnown RBP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 NDFIP2Q9NV92 336 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 ZMYM2Q9UBW7 1377 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 ARL5CA6NH57 179 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 RBAK-RBAKDNI3L0D1 243 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 EDIL3O43854 480 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 ERBB2P04626 1255 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 PECAM1P16284 738 aaPredicted RBP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 TUFMP49411 452 aaKnown RBP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 AMPD2Q01433 879 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 ACAP1Q15027 740 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 GDF6Q6KF10 455 aaPredicted RBP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 PMF1Q6P1K2 205 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 LRRC8DQ7L1W4 858 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 OTOP2Q7RTS6 562 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 TBC1D1Q86TI0 1168 aaPredicted RBP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 NLRP14Q86W24 1093 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 SLC4A11Q8NBS3 891 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 LPIN3Q9BQK8 851 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 NT5MQ9NPB1 228 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 MARCH2Q9P0N8 246 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 SF3B1O75533 1304 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■■■ 69.6
SGSM3-209ENST00000478085 RASSF10A6NK89 507 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 CAND2O75155 1236 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 USP12O75317 370 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 TPH1P17752 444 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 EDNRBP24530 442 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 OR1D2P34982 312 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 FAM35AQ86V20 835 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
SGSM3-209ENST00000478085 FBXL18Q96ME1 805 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 DPEP3Q9H4B8 488 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 GTSE1Q9NYZ3 720 aa12.25□□□□□ -0.45
SGSM3-209ENST00000478085 TGM2P21980 687 aa12.24□□□□□ -0.45
SGSM3-209ENST00000478085 OR1E1P30953 314 aa12.24□□□□□ -0.45
SGSM3-209ENST00000478085 RABGGTBP53611 331 aa12.24□□□□□ -0.45
SGSM3-209ENST00000478085 ST8SIA6P61647 398 aa12.24□□□□□ -0.45
SGSM3-209ENST00000478085 TRADDQ15628 312 aa12.24□□□□□ -0.45
SGSM3-209ENST00000478085 LCLAT1Q6UWP7 414 aa12.24□□□□□ -0.45
SGSM3-209ENST00000478085 C16orf70Q9BSU1 422 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms