RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ATP11AP98196 1134 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 CAP1Q01518 475 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 OTUD4Q01804 1114 aaKnown RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 ROR1Q01973 937 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 YWHAHQ04917 246 aaPredicted RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 ADCY1Q08828 1119 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 ZNF844Q08AG5 666 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 ADIGQ0VDE8 80 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 SCAPQ12770 1279 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 NR1H3Q13133 447 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 MTA1Q13330 715 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 STAT4Q14765 748 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 RASA2Q15283 850 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 C15orf59Q2T9L4 293 aaPredicted RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 SMTNL2Q2TAL5 461 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 P3H1Q32P28 736 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 PLEKHG4Q58EX7 1191 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 ANKRD20A8PQ5CZ79 823 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 KCNT1Q5JUK3 1230 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 ACBD5Q5T8D3 534 aaPredicted RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 C1orf53Q5VUE5 145 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 DAB2IPQ5VWQ8 1189 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TXNRD3NBQ6F5E7 133 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 MFSD5Q6N075 450 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TRNP1Q6NT89 227 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 SCYL2Q6P3W7 929 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 VSTM1Q6UX27 236 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 KDM7AQ6ZMT4 941 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 CYP4V2Q6ZWL3 525 aaPredicted RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 CENPUQ71F23 418 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 FAM126BQ8IXS8 530 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 PPIL6Q8IXY8 311 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 RNF169Q8NCN4 708 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 FAM149B1Q96BN6 582 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TOX2Q96NM4 488 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 SERPINB12Q96P63 405 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TMEM175Q9BSA9 504 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 SNRNP25Q9BV90 132 aaKnown RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 COLEC11Q9BWP8 271 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TRPV6Q9H1D0 765 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 PLEKHA4Q9H4M7 779 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 PAK6Q9NQU5 681 aaPredicted RBP8.26□□□□□ -1.09
VMA21-203ENST00000477649 KLHL11Q9NVR0 708 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 COMMD8Q9NX08 183 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 PAK5Q9P286 719 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 FETUBQ9UGM5 382 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 OGDHLQ9ULD0 1010 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 VPS9D1Q9Y2B5 631 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 TRIM17Q9Y577 477 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 PCDHB7Q9Y5E2 793 aa8.26□□□□□ -1.09
VMA21-203ENST00000477649 MYBPHLA2RUH7 354 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 SHOX2O60902 331 aaPredicted RBP8.25□□□□□ -1.09
VMA21-203ENST00000477649 SPAG6O75602 509 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 GRAP2O75791 330 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 STK10O94804 968 aaKnown RBP8.25□□□□□ -1.09
VMA21-203ENST00000477649 ZBED1O96006 694 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 AGTP01019 485 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 LTFP02788 710 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 ATP2A2P16615 1042 aaKnown RBP8.25□□□□□ -1.09
VMA21-203ENST00000477649 L1CAMP32004 1257 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 MAGEA11P43364 429 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 SULT1E1P49888 294 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 ARL4CP56559 192 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 MAP3K7CLP57077 242 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 RNASELQ05823 741 aaKnown RBP8.25□□□□□ -1.09
VMA21-203ENST00000477649 DEUP1Q05D60 604 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 GPS1Q13098 491 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 SLC29A2Q14542 456 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 CDO1Q16878 200 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 KRT71Q3SY84 523 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 DCAF6Q58WW2 860 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 EFHC2Q5JST6 749 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 RNASEH2BQ5TBB1 312 aaKnown RBP8.25□□□□□ -1.09
VMA21-203ENST00000477649 DARS2Q6PI48 645 aaKnown RBP8.25□□□□□ -1.09
VMA21-203ENST00000477649 LEKR1Q6ZMV7 388 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 TAOK1Q7L7X3 1001 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 ANKRD33Q7Z3H0 272 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 ANKS1BQ7Z6G8 1248 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 SPATA2LQ8IUW3 424 aaPredicted RBP8.25□□□□□ -1.09
VMA21-203ENST00000477649 COLGALT2Q8IYK4 626 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 TNS4Q8IZW8 715 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 DEFB106AQ8N104 65 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 ARHGAP18Q8N392 663 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 TMEM130Q8N3G9 435 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 PLD5Q8N7P1 536 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 C3orf58Q8NDZ4 430 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 C2orf15Q8WU43 125 aaKnown RBP8.25□□□□□ -1.09
VMA21-203ENST00000477649 MYLPFQ96A32 169 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 PEBP4Q96S96 227 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 PKMYT1Q99640 499 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 SMOQ99835 787 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 NRDE2Q9H7Z3 1164 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 DONSONQ9NYP3 566 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 LRFN2Q9ULH4 789 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 FZD10Q9ULW2 581 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 AP4E1Q9UPM8 1137 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 INPP5FQ9Y2H2 1132 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 USP3Q9Y6I4 520 aa8.25□□□□□ -1.09
VMA21-203ENST00000477649 A0A087WUV0 522 aaPredicted RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 DCDC2CA8MYV0 355 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms