RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 MRPS35P82673 323 aaKnown RBP18.75■□□□□ 0.59
CCM2-209ENST00000477605 SLC10A6Q3KNW5 377 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 KHDC1Q4VXA5 237 aaKnown RBP18.75■□□□□ 0.59
CCM2-209ENST00000477605 STXBP5Q5T5C0 1151 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 CAPRIN2Q6IMN6 1127 aaKnown RBP18.75■□□□□ 0.59
CCM2-209ENST00000477605 DNAJC5GQ8N7S2 189 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 PCDH19Q8TAB3 1148 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 GSDMBQ8TAX9 411 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 SIKE1Q9BRV8 207 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 SLC4A5Q9BY07 1137 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 WWP1Q9H0M0 922 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 PDZD7Q9H5P4 517 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 XAB2Q9HCS7 855 aaKnown RBP18.75■□□□□ 0.59
CCM2-209ENST00000477605 TAS2R1Q9NYW7 299 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 GGA3Q9NZ52 723 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 FAM159BA6NKW6 160 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 PFKMP08237 780 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 IQCF3P0C7M6 154 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 CYP3A5P20815 502 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 CRHR1P34998 444 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 RAP1GDS1P52306 607 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 SLC6A3Q01959 620 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 OLFML1Q6UWY5 402 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 TMEM110Q86TL2 294 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 KIRREL3Q8IZU9 778 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 TRAPPC12Q8WVT3 735 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 EBNA1BP2Q99848 306 aaKnown RBP18.75■□□□□ 0.59
CCM2-209ENST00000477605 ERAP1Q9NZ08 941 aa18.75■□□□□ 0.59
CCM2-209ENST00000477605 GJB1P08034 283 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 ABL2P42684 1182 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 OCRLQ01968 901 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 VGLL4Q14135 290 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 CCDC6Q16204 474 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 PKDCCQ504Y2 493 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 CDHR3Q6ZTQ4 885 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
CCM2-209ENST00000477605 ARCQ7LC44 396 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 SESTD1Q86VW0 696 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 TMPRSS6Q8IU80 811 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 PRDM16Q9HAZ2 1276 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 FBXO6Q9NRD1 293 aaPredicted RBP18.74■□□□□ 0.59
CCM2-209ENST00000477605 ADARB2Q9NS39 739 aaKnown RBP18.74■□□□□ 0.59
CCM2-209ENST00000477605 DPP3Q9NY33 737 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 ZFATQ9P243 1243 aa18.74■□□□□ 0.59
CCM2-209ENST00000477605 CXorf49A8MYA2 514 aaPredicted RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 F8W8V4 182 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 NVLO15381 856 aaKnown RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 APRTP07741 180 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 SCYL2Q6P3W7 929 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 RFWD3Q6PCD5 774 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 DSTYKQ6XUX3 929 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 UNC5AQ6ZN44 842 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 RINLQ6ZS11 566 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 CCDC110Q8TBZ0 833 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 TRPM4Q8TD43 1214 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 MICAL1Q8TDZ2 1067 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 FAM172AQ8WUF8 416 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 SIGLEC10Q96LC7 697 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 FGD4Q96M96 766 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 SNRNP25Q9BV90 132 aaKnown RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 ASCC2Q9H1I8 757 aaPredicted RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 PLAC1Q9HBJ0 212 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 SORCS3Q9UPU3 1222 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 HEY1Q9Y5J3 304 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 DNAJC25-GNG10A0A024R161 153 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 FAM237BA0A1B0GVD1 139 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 CAPN14A8MX76 684 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 SCNN1AP37088 669 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 PTPN9P43378 593 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 MRPS5P82675 430 aaKnown RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 SARNPP82979 210 aaKnown RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 TMPRSS15P98073 1019 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 SLC34A1Q06495 639 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 BST1Q10588 318 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 CDO1Q16878 200 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 GOLGA7BQ2TAP0 167 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 APBB1IPQ7Z5R6 666 aaPredicted RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 CRLF3Q8IUI8 442 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 NUDCD3Q8IVD9 361 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 LINC01465Q8N7H1 131 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 ZNF333Q96JL9 665 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 NRDE2Q9H7Z3 1164 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 NGRNQ9NPE2 291 aaKnown RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 STX18Q9P2W9 335 aaKnown RBP18.73■□□□□ 0.59
CCM2-209ENST00000477605 GTF2IRD1Q9UHL9 959 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 PCDHA11Q9Y5I1 949 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 LRRC37A2A6NM11 1700 aa18.73■□□□□ 0.59
CCM2-209ENST00000477605 H0Y3Z8 333 aa18.72■□□□□ 0.59
CCM2-209ENST00000477605 PEX10O60683 326 aa18.72■□□□□ 0.59
CCM2-209ENST00000477605 SNNO75324 88 aaPredicted RBP18.72■□□□□ 0.59
CCM2-209ENST00000477605 CNMDO75829 334 aa18.72■□□□□ 0.59
CCM2-209ENST00000477605 PSMG1O95456 288 aa18.72■□□□□ 0.59
CCM2-209ENST00000477605 PAX7P23759 505 aa18.72■□□□□ 0.59
CCM2-209ENST00000477605 LBRQ14739 615 aaKnown RBP18.72■□□□□ 0.59
CCM2-209ENST00000477605 MUM1Q2TAK8 710 aa18.72■□□□□ 0.59
CCM2-209ENST00000477605 KYAT3Q6YP21 454 aaKnown RBP18.72■□□□□ 0.59
CCM2-209ENST00000477605 ACMSDQ8TDX5 336 aa18.72■□□□□ 0.59
CCM2-209ENST00000477605 STMN2Q93045 179 aa18.72■□□□□ 0.59
CCM2-209ENST00000477605 ZNF668Q96K58 619 aaPredicted RBP18.72■□□□□ 0.59
CCM2-209ENST00000477605 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms