RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TRMT11Q7Z4G4 463 aaKnown RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 KIAA1958Q8N8K9 716 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 XXYLT1Q8NBI6 393 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 ADAMTS14Q8WXS8 1223 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 SORCS1Q8WY21 1168 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 OVCA2Q8WZ82 227 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 OTUB2Q96DC9 234 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 SMARCD1Q96GM5 515 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 TOE1Q96GM8 510 aaKnown RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 ZNF419Q96HQ0 510 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 MKRN2Q9H000 416 aaKnown RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 SLC39A2Q9NP94 309 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 BTBD3Q9Y2F9 522 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 FNDC3AQ9Y2H6 1198 aaKnown RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 STARD13Q9Y3M8 1113 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 STON1Q9Y6Q2 735 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 DSPP15924 2871 aaKnown RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 LAMA5O15230 3695 aa12.65□□□□□ -0.39
HDAC6-219ENST00000476625 FREM2Q5SZK8 3169 aa12.65□□□□□ -0.39
HDAC6-219ENST00000476625 NYNRINQ9P2P1 1898 aaKnown RBP12.64□□□□□ -0.39
HDAC6-219ENST00000476625 A0A1W2PQD8 194 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 A0A1W2PQH9 124 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 FAM92AA1XBS5 289 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 FAM149AA5PLN7 773 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 MEI4A8MW99 385 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 HHLA1C9JL84 531 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 CBFA2T3O75081 653 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 ATXN1LP0C7T5 689 aaKnown RBP12.64□□□□□ -0.39
HDAC6-219ENST00000476625 HOXD12P35452 270 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 NDST1P52848 882 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 CLDN6P56747 220 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 CUL4AQ13619 759 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 SLC39A14Q15043 492 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 ZNF423Q2M1K9 1284 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 DCAF12L1Q5VU92 463 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-219ENST00000476625 CCNI2Q6ZMN8 369 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-219ENST00000476625 HTR3DQ70Z44 454 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 FAM124AQ86V42 546 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 SETD7Q8WTS6 366 aaKnown RBP12.64□□□□□ -0.39
HDAC6-219ENST00000476625 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-219ENST00000476625 KBTBD4Q9NVX7 518 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 TOR4AQ9NXH8 423 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 PCOLCE2Q9UKZ9 415 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 PCDHB9Q9Y5E1 797 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 ATRXP46100 2492 aa12.64□□□□□ -0.39
HDAC6-219ENST00000476625 KCNK3O14649 394 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC6-219ENST00000476625 STAU1O95793 577 aaKnown RBP12.63□□□□□ -0.39
HDAC6-219ENST00000476625 KLKB1P03952 638 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 C4BPAP04003 597 aaKnown RBP12.63□□□□□ -0.39
HDAC6-219ENST00000476625 SYPP08247 313 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 NCAM1P13591 858 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 PRKCHP24723 683 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 CD6P30203 668 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 TUBP50607 506 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 EHHADHQ08426 723 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 CUL4BQ13620 913 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 NCOA4Q13772 614 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 NUMA1Q14980 2115 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-219ENST00000476625 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-219ENST00000476625 Q6ZNB5 142 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 ZNF366Q8N895 744 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-219ENST00000476625 TNMDQ9H2S6 317 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 PRDM16Q9HAZ2 1276 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 KIAA1586Q9HCI6 787 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 WSB2Q9NYS7 404 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-219ENST00000476625 MARK1Q9P0L2 795 aa12.63□□□□□ -0.39
HDAC6-219ENST00000476625 EIF2B4Q9UI10 523 aaKnown RBP12.63□□□□□ -0.39
HDAC6-219ENST00000476625 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 LOC400499M0QZD8 3231 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 A0A1B0GVT2 93 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 H0Y626 953 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 EXOC3O60645 756 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 ZNF217O75362 1048 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 STC2O76061 302 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 TRIM16O95361 564 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 RARGP13631 454 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 HLA-EP13747 358 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 ACO1P21399 889 aaKnown RBP12.62□□□□□ -0.39
HDAC6-219ENST00000476625 DPP6P42658 865 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 AFMP43652 599 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 COPAP53621 1224 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 MFAP3P55082 362 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 STK38Q15208 465 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 CCDC157Q569K6 752 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 TMEM215Q68D42 235 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 SDE2Q6IQ49 451 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 CLEC20AQ6ZU45 233 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 STXBP4Q6ZWJ1 553 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 LRIG1Q96JA1 1093 aa12.62□□□□□ -0.39
HDAC6-219ENST00000476625 XPO6Q96QU8 1125 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms