RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 NDC80O14777 642 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 HUS1O60921 280 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 APRTP07741 180 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 PHBP35232 272 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ZNF157P51786 506 aaPredicted RBP17.28■□□□□ 0.36
TVP23B-202ENST00000476139 IL9RQ01113 521 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 NR1H3Q13133 447 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 FSCN1Q16658 493 aaKnown RBP17.28■□□□□ 0.36
TVP23B-202ENST00000476139 PIGZQ86VD9 579 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 FAM131BQ86XD5 332 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ZDHHC17Q8IUH5 632 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 CENPIQ92674 756 aaPredicted RBP17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ETNK2Q9NVF9 386 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 COX16Q9P0S2 106 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 L3MBTL1Q9Y468 752 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 KBTBD13C9JR72 458 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 TYROBPO43914 113 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ZBED1O96006 694 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 PURAQ00577 322 aaKnown RBP17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ADGRD1Q6QNK2 874 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 B3GALNT2Q8NCR0 500 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 USP6NLQ92738 828 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 FAM149B1Q96BN6 582 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 NOD2Q9HC29 1040 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 AP4E1Q9UPM8 1137 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 TCRBV9S1A1TA0A576 114 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 MGRN1O60291 552 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ATP6V1G2O95670 118 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ADIGQ0VDE8 80 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 KIAA0319Q5VV43 1072 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 WSCD1Q658N2 575 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 TRIM56Q9BRZ2 755 aaKnown RBP17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ZNF670Q9BS34 389 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ETNK1Q9HBU6 452 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 ARL2BPQ9Y2Y0 163 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 TEX264Q9Y6I9 313 aa17.28■□□□□ 0.36
TVP23B-202ENST00000476139 PRPF4O43172 522 aaKnown RBP eCLIP17.27■□□□□ 0.36
TVP23B-202ENST00000476139 C6orf222P0C671 652 aaPredicted RBP17.27■□□□□ 0.36
TVP23B-202ENST00000476139 RARBP10826 455 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 TGM2P21980 687 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 PTPN9P43378 593 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 DPYSL2Q16555 572 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 KBTBD12Q3ZCT8 623 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 PRPF39Q86UA1 669 aaKnown RBP17.27■□□□□ 0.36
TVP23B-202ENST00000476139 DEFB106AQ8N104 65 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 DCAKDQ8WVC6 231 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 KLHL29Q96CT2 875 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 ZNF560Q96MR9 790 aa17.27■□□□□ 0.36
TVP23B-202ENST00000476139 TIMM13Q9Y5L4 95 aaPredicted RBP17.27■□□□□ 0.36
TVP23B-202ENST00000476139 F5H423 210 aaPredicted RBP17.27■□□□□ 0.35
TVP23B-202ENST00000476139 GOT1P17174 413 aa17.27■□□□□ 0.35
TVP23B-202ENST00000476139 AMPD1P23109 780 aa17.27■□□□□ 0.35
TVP23B-202ENST00000476139 MSH2P43246 934 aa17.27■□□□□ 0.35
TVP23B-202ENST00000476139 SNX16P57768 344 aa17.27■□□□□ 0.35
TVP23B-202ENST00000476139 YWHAGP61981 247 aaKnown RBP eCLIP17.27■□□□□ 0.35
TVP23B-202ENST00000476139 PAQR9Q6ZVX9 377 aa17.27■□□□□ 0.35
TVP23B-202ENST00000476139 ECHDC2Q86YB7 292 aa17.27■□□□□ 0.35
TVP23B-202ENST00000476139 KCTD15Q96SI1 283 aaPredicted RBP17.27■□□□□ 0.35
TVP23B-202ENST00000476139 DHRS4Q9BTZ2 278 aa17.27■□□□□ 0.35
TVP23B-202ENST00000476139 CYB561D2O14569 222 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 METTL18O95568 372 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 PNPLA4P41247 253 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 RPL34P49207 117 aaKnown RBP17.26■□□□□ 0.35
TVP23B-202ENST00000476139 DCAF6Q58WW2 860 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 LIMS2Q7Z4I7 341 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 GSTCDQ8NEC7 633 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 MZB1Q8WU39 189 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 WNT8BQ93098 351 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 CSPG4P5Q96PW8 444 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 ALG13Q9NP73 1137 aaKnown RBP17.26■□□□□ 0.35
TVP23B-202ENST00000476139 PAK5Q9P286 719 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.26■□□□□ 0.35
TVP23B-202ENST00000476139 BCLAF3A2AJT9 711 aaKnown RBP17.26■□□□□ 0.35
TVP23B-202ENST00000476139 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 FAM155BO75949 473 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 CTGFP29279 349 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 SV2CQ496J9 727 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 C17orf99Q6UX52 265 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 CAND1Q86VP6 1230 aaKnown RBP17.26■□□□□ 0.35
TVP23B-202ENST00000476139 LPPQ93052 612 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 PHACTR1Q9C0D0 580 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.26■□□□□ 0.35
TVP23B-202ENST00000476139 KLHL14Q9P2G3 628 aa17.26■□□□□ 0.35
TVP23B-202ENST00000476139 CHADO15335 359 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 KRT16P08779 473 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 CTSHP09668 335 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 SYPL2Q5VXT5 272 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 KCNT2Q6UVM3 1135 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 CXCL17Q6UXB2 119 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 ANKLE1Q8NAG6 615 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 CFAP36Q96G28 342 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 XPOTO43592 962 aaKnown RBP17.25■□□□□ 0.35
TVP23B-202ENST00000476139 RPSAP08865 295 aaKnown RBP17.25■□□□□ 0.35
TVP23B-202ENST00000476139 NQO1P15559 274 aaKnown RBP17.25■□□□□ 0.35
TVP23B-202ENST00000476139 DESP17661 470 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 MLH1P40692 756 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 GRIA1P42261 906 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 YWHAZP63104 245 aaKnown RBP17.25■□□□□ 0.35
TVP23B-202ENST00000476139 RASA2Q15283 850 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 MTFR1Q15390 333 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms