RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 BTBD7Q9P203 1132 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 RALAP11233 206 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 GYS1P13807 737 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 PRIM2P49643 509 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 CHRNDQ07001 517 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 CYP1B1Q16678 543 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 NSL1Q96IY1 281 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 THAP2Q9H0W7 228 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 SIX2Q9NPC8 291 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 CDY2AQ9Y6F7 541 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 CDY1Q9Y6F8 540 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 BUD23O43709 281 aaKnown RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 DARSP14868 501 aaKnown RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 SPRP35270 261 aaPredicted RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 HOXD12P35452 270 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 ITGA9Q13797 1035 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 RSBN1Q5VWQ0 802 aaPredicted RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 RAD54LQ92698 747 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 DNAJC19Q96DA6 116 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 MCRS1Q96EZ8 462 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 PLA2G12BQ9BX93 195 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 RNPEPQ9H4A4 650 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 HPS4Q9NQG7 708 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 PPM1HQ9ULR3 514 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 TMEM98Q9Y2Y6 226 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 ZHX2Q9Y6X8 837 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 TEX28O15482 410 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 CNOT3O75175 753 aaKnown RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 IDO1P14902 403 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 RPA3P35244 121 aaPredicted RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 SIX1Q15475 284 aaPredicted RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 SLC1A5Q15758 541 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 RBM44Q6ZP01 1051 aaKnown RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 PALB2Q86YC2 1186 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 DAGLBQ8NCG7 672 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 CALML6Q8TD86 181 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 HSPBAP1Q96EW2 488 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 TNIP3Q96KP6 325 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 C2orf40Q9H1Z8 148 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 ADAM30Q9UKF2 790 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 TMCC3Q9ULS5 477 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 MTO1Q9Y2Z2 717 aaKnown RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 ZMYM2Q9UBW7 1377 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 GNA15P30679 374 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 AP3B2Q13367 1082 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 TRABD2AQ86V40 505 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 DENND6AQ8IWF6 608 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 C19orf18Q8NEA5 215 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 KCTD10Q9H3F6 313 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 FBXO6Q9NRD1 293 aaPredicted RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 TAS2R14Q9NYV8 317 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 KANSL1LA0AUZ9 987 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 APRTP07741 180 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 EIF3EP60228 445 aaKnown RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 OVGP1Q12889 678 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 SLC35G1Q2M3R5 365 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 ARMC4Q5T2S8 1044 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 KLHL35Q6PF15 583 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 KLHDC10Q6PID8 442 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 ANKRD49Q8WVL7 239 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 PRICKLE1Q96MT3 831 aaPredicted RBP11.86□□□□□ -0.51
U2AF1-209ENST00000475639 SYNDIG1Q9H7V2 258 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 WHRNQ9P202 907 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 HEY2Q9UBP5 337 aa11.86□□□□□ -0.51
U2AF1-209ENST00000475639 DYTNA2CJ06 578 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 TSC22D2O75157 780 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 ALDH1A1P00352 501 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 PGK2P07205 417 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 RARBP10826 455 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 PPP3CCP48454 512 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 CDH24Q86UP0 819 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 OR6Y1Q8NGX8 325 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 WDR36Q8NI36 951 aaKnown RBP11.85□□□□□ -0.51
U2AF1-209ENST00000475639 URGCPQ8TCY9 931 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 PRRG3Q9BZD7 231 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 OSBPL6Q9BZF3 934 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 UBA2Q9UBT2 640 aaPredicted RBP11.85□□□□□ -0.51
U2AF1-209ENST00000475639 MARCOQ9UEW3 520 aaPredicted RBP11.85□□□□□ -0.51
U2AF1-209ENST00000475639 LOC100653049A0A140TA62 436 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.85□□□□□ -0.51
U2AF1-209ENST00000475639 H3BMM5 538 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 DNALI1O14645 258 aaPredicted RBP11.85□□□□□ -0.51
U2AF1-209ENST00000475639 KRT34O76011 436 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 APBA3O96018 575 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 ABCB1P08183 1280 aaPredicted RBP11.85□□□□□ -0.51
U2AF1-209ENST00000475639 FGFR2P21802 821 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 PAX3P23760 479 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 NME3Q13232 169 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 DCTN2Q13561 401 aaKnown RBP11.85□□□□□ -0.51
U2AF1-209ENST00000475639 COG2Q14746 738 aa11.85□□□□□ -0.51
U2AF1-209ENST00000475639 DRAP1Q14919 205 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms