RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 APBA1Q02410 837 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
CPSF3-203ENST00000475482 PON2Q15165 354 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 SPA17Q15506 151 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 ARHGAP44Q17R89 818 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 EML3Q32P44 896 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 CC2D1AQ6P1N0 951 aaPredicted RBP16.46■□□□□ 0.23
CPSF3-203ENST00000475482 C12orf29Q8N999 325 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 SH3RF2Q8TEC5 729 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 SLITRK1Q96PX8 696 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 CHP1Q99653 195 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 HNRNPABQ99729 332 aaKnown RBP16.46■□□□□ 0.23
CPSF3-203ENST00000475482 SMOQ99835 787 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 NIF3L1Q9GZT8 377 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 ECT2Q9H8V3 914 aa16.46■□□□□ 0.23
CPSF3-203ENST00000475482 EPN1Q9Y6I3 576 aaPredicted RBP16.46■□□□□ 0.23
CPSF3-203ENST00000475482 EIF3CLB5ME19 914 aaKnown RBP16.45■□□□□ 0.22
CPSF3-203ENST00000475482 BEST1O76090 585 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 CCDC130P13994 396 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 YWHAQP27348 245 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 SLC5A3P53794 718 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 GJB7Q6PEY0 223 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 TSSK4Q6SA08 328 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 Q6ZS52 159 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 ARHGEF19Q8IW93 802 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 CCAR2Q8N163 923 aaKnown RBP16.45■□□□□ 0.22
CPSF3-203ENST00000475482 PDZD8Q8NEN9 1154 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 SCAMP5Q8TAC9 235 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 EIF3CQ99613 913 aaKnown RBP16.45■□□□□ 0.22
CPSF3-203ENST00000475482 FAM124BQ9H5Z6 455 aaPredicted RBP16.45■□□□□ 0.22
CPSF3-203ENST00000475482 KRT82Q9NSB4 513 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 DUS2Q9NX74 493 aaKnown RBP16.45■□□□□ 0.22
CPSF3-203ENST00000475482 MYO16Q9Y6X6 1858 aa16.45■□□□□ 0.22
CPSF3-203ENST00000475482 HHLA1C9JL84 531 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 LEFTY2O00292 366 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 AP1G2O75843 785 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 TUBB4AP04350 444 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 HOXA6P31267 233 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 GJA4P35212 333 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 CXCL12P48061 93 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 TUBP50607 506 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 BPIFB4P59827 614 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 AMPD2Q01433 879 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 SATB1Q01826 763 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 ARID5AQ03989 594 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 ORC1Q13415 861 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 E4F1Q66K89 784 aaPredicted RBP16.44■□□□□ 0.22
CPSF3-203ENST00000475482 FSTL4Q6MZW2 842 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 RAD9BQ6WBX8 426 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 IRF2BP2Q7Z5L9 587 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 SHC3Q92529 594 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 MED10Q9BTT4 135 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 NT5C1AQ9BXI3 368 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 ARHGAP20Q9P2F6 1191 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 PPP2R2CQ9Y2T4 447 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 WNT6Q9Y6F9 365 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 KIAA1549LQ6ZVL6 1849 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 FRYLO94915 3013 aa16.44■□□□□ 0.22
CPSF3-203ENST00000475482 K7ESF4 209 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 EIF4A3P38919 411 aaKnown RBP16.43■□□□□ 0.22
CPSF3-203ENST00000475482 USP8P40818 1118 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 CUL2Q13617 745 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 C10orf76Q5T2E6 689 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 HGSNATQ68CP4 663 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 CLEC20AQ6ZU45 233 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 CPA6Q8N4T0 437 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 TTC39CQ8N584 583 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 ATP2A3Q93084 1043 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 FBXO32Q969P5 355 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 CYFIP2Q96F07 1278 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 ZFRQ96KR1 1074 aaKnown RBP16.43■□□□□ 0.22
CPSF3-203ENST00000475482 EPC1Q9H2F5 836 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 LINC00597Q9H2U6 94 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 FBRSL1Q9HCM7 1045 aaKnown RBP16.43■□□□□ 0.22
CPSF3-203ENST00000475482 PNPLA8Q9NP80 782 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.22
CPSF3-203ENST00000475482 FAM49BQ9NUQ9 324 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 SPTLC3Q9NUV7 552 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 C2orf42Q9NWW7 574 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 ADGRG1Q9Y653 693 aa16.43■□□□□ 0.22
CPSF3-203ENST00000475482 KIF2AO00139 706 aaPredicted RBP16.42■□□□□ 0.22
CPSF3-203ENST00000475482 FOXN3O00409 490 aaPredicted RBP16.42■□□□□ 0.22
CPSF3-203ENST00000475482 IFNAR2P48551 515 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 GALK1P51570 392 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 KIF11P52732 1056 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 NRLP54845 237 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 PPP2R5DQ14738 602 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 GAB4Q2WGN9 574 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 TOGARAM2Q6ZUX3 1019 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 FAM71AQ8IYT1 594 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 ADGRG2Q8IZP9 1017 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 ATRIPQ8WXE1 791 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 TATDN2Q93075 761 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.42■□□□□ 0.22
CPSF3-203ENST00000475482 HAUS4Q9H6D7 363 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 CHORDC1Q9UHD1 332 aaPredicted RBP16.42■□□□□ 0.22
CPSF3-203ENST00000475482 AJAP1Q9UKB5 411 aaPredicted RBP16.42■□□□□ 0.22
CPSF3-203ENST00000475482 CPQQ9Y646 472 aa16.42■□□□□ 0.22
CPSF3-203ENST00000475482 CEP250Q9BV73 2442 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms