RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ULBP1Q9BZM6 244 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 TRPV6Q9H1D0 765 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 COX16Q9P0S2 106 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 XPO7Q9UIA9 1087 aaKnown RBP15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 TDRD15B5MCY1 1934 aaKnown RBP15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 E7EVH7 732 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 M0QYT0 321 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 CAPN9O14815 690 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 MAP3K6O95382 1288 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 ZBED1O96006 694 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 ARHGEF2Q92974 986 aaKnown RBP15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 SMARCD1Q96GM5 515 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 UROC1Q96N76 676 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 NPY6RQ99463 290 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 CFHR5Q9BXR6 569 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 VPS37BQ9H9H4 285 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 USP29Q9HBJ7 922 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 MTMR10Q9NXD2 777 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 CTNNAL1Q9UBT7 734 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 RSPH14Q9UHP6 348 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 DSEQ9UL01 958 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 FZD10Q9ULW2 581 aa15.97■□□□□ 0.15
RPUSD3-215ENST00000475470 RBL1P28749 1068 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 ARL4AP40617 200 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 SEC24CP53992 1094 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 GAD2Q05329 585 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 SYPL2Q5VXT5 272 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 HFE2Q6ZVN8 426 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 ZNF598Q86UK7 904 aaKnown RBP15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 EXOC3L1Q86VI1 746 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 ZMIZ2Q8NF64 920 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 NT5C3BQ969T7 300 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 CSPG4P5Q96PW8 444 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 SLC2A13Q96QE2 648 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 ACBD6Q9BR61 282 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 CNGB3Q9NQW8 809 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 PAK5Q9P286 719 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 TCRBV7S3A2A0A539 114 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 BCLAF3A2AJT9 711 aaKnown RBP15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 SRRM3A6NNA2 597 aaPredicted RBP15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 NRP1O14786 923 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 CDH16O75309 829 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 CHN1P15882 459 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 PAX3P23760 479 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 CCT5P48643 541 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 CACNA2D1P54289 1103 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 DAOAP59103 153 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 PITX1P78337 314 aaPredicted RBP15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 DEUP1Q05D60 604 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 NME3Q13232 169 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 FNBP1LQ5T0N5 605 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 CAPN12Q6ZSI9 719 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 ANKMY2Q8IV38 441 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 PSTKQ8IV42 348 aaKnown RBP15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 CCDC13Q8IYE1 715 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 PYROXD2Q8N2H3 581 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 MYLPFQ96A32 169 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 RTP3Q9BQQ7 232 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 TSEN34Q9BSV6 310 aaKnown RBP15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 PHACTR1Q9C0D0 580 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 RGS18Q9NS28 235 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 NAALADL1Q9UQQ1 740 aa15.96■□□□□ 0.15
RPUSD3-215ENST00000475470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 EXOC1LA0A1B0GW35 172 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 CYP11A1P05108 521 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 INHAP05111 366 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 USP17L7P0C7H9 530 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 GOT1P17174 413 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 CD300LGQ6UXG3 332 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 GPRIN1Q7Z2K8 1008 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 NLRP14Q86W24 1093 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 CDKL3Q8IVW4 592 aaPredicted RBP15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 PDIK1LQ8N165 341 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 PYROXD1Q8WU10 500 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 STARD7Q9NQZ5 370 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 TMEM30AQ9NV96 361 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 TBK1Q9UHD2 729 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 GMNCA6NCL1 334 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 YJEFN3A6XGL0 299 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 E7ENQ6 273 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 M0QZQ0 153 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 BANF1O75531 89 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 TMEM63AO94886 807 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 AMPD1P23109 780 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 YY1P25490 414 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 NR2C2P49116 596 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 GBE1Q04446 702 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 INTS6LQ5JSJ4 861 aaKnown RBP15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 RAB41Q5JT25 222 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 OTUD1Q5VV17 481 aaPredicted RBP15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 DCLRE1AQ6PJP8 1040 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 SLC7A14Q8TBB6 771 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 RSPH1Q8WYR4 309 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 CENPTQ96BT3 561 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 RTP4Q96DX8 246 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 RHOBTB2Q9BYZ6 727 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 HMX1Q9NP08 348 aaPredicted RBP15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 LGALS13Q9UHV8 139 aa15.95■□□□□ 0.14
RPUSD3-215ENST00000475470 A0A1W2PQ45 241 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms