RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 YWHAZP63104 245 aaKnown RBP17.72■□□□□ 0.43
SCAF11-206ENST00000474828 COG7P83436 770 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 PRKCQQ04759 706 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 NNTQ13423 1086 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 TRIP4Q15650 581 aaPredicted RBP17.72■□□□□ 0.43
SCAF11-206ENST00000474828 EML3Q32P44 896 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 EFHC1Q5JVL4 640 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 C10orf120Q5SQS8 335 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 Q6ZNB5 142 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 XYLT1Q86Y38 959 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 ZNF687Q8N1G0 1237 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 SLC30A5Q8TAD4 765 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 NT5C3BQ969T7 300 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 C18orf8Q96DM3 657 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 MRFAP1L1Q96HT8 127 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 DNAJC7Q99615 494 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 MIS12Q9H081 205 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 BRD9Q9H8M2 597 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 POPDC2Q9HBU9 364 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 HPS4Q9NQG7 708 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 GKN1Q9NS71 199 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 LUC7L2Q9Y383 392 aaKnown RBP17.72■□□□□ 0.43
SCAF11-206ENST00000474828 HCN4Q9Y3Q4 1203 aa17.72■□□□□ 0.43
SCAF11-206ENST00000474828 HBS1LQ9Y450 684 aaKnown RBP17.72■□□□□ 0.43
SCAF11-206ENST00000474828 BZW2Q9Y6E2 419 aaKnown RBP17.72■□□□□ 0.43
SCAF11-206ENST00000474828 FAM86C2PA6NEL3 165 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 PIK3R2O00459 728 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 HSF2BPO75031 334 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 STC2O76061 302 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 GZMAP12544 262 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 SLC6A3Q01959 620 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 RING1Q06587 406 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 ASIC2Q16515 512 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 SLC44A4Q53GD3 710 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 IER5LQ5T953 404 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 NAA35Q5VZE5 725 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 FAM183BPQ6ZVS7 135 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 ZNF571Q7Z3V5 609 aaPredicted RBP17.71■□□□□ 0.43
SCAF11-206ENST00000474828 ERICH1Q86X53 443 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 YAF2Q8IY57 180 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 ADGRG2Q8IZP9 1017 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 IPO4Q8TEX9 1081 aaKnown RBP17.71■□□□□ 0.43
SCAF11-206ENST00000474828 WBP2Q969T9 261 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 HAUS4Q9H6D7 363 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 SMPD4Q9NXE4 827 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 MARCH2Q9P0N8 246 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 CFAP97Q9P2B7 532 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 TBC1D14Q9P2M4 693 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 STOML2Q9UJZ1 356 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 NUDT5Q9UKK9 219 aa17.71■□□□□ 0.43
SCAF11-206ENST00000474828 TCRBV5S1A1TA0A578 114 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 TMEM221A6NGB7 291 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 OTOL1A6NHN0 477 aaPredicted RBP17.7■□□□□ 0.42
SCAF11-206ENST00000474828 M0R296 226 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 SLC9A3R1O14745 358 aaPredicted RBP17.7■□□□□ 0.42
SCAF11-206ENST00000474828 MDM4O15151 490 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 KLKB1P03952 638 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 CASP14P31944 242 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 KPNA1P52294 538 aaPredicted RBP17.7■□□□□ 0.42
SCAF11-206ENST00000474828 ARID5AQ03989 594 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 RUNX3Q13761 415 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 TAF5Q15542 800 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 PPP1R2P3Q6NXS1 205 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 TOGARAM2Q6ZUX3 1019 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 MON1BQ7L1V2 547 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 BNIPLQ7Z465 357 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 FAM217AQ8IXS0 508 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 MSANTD4Q8NCY6 345 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 CPA5Q8WXQ8 436 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 EDEM1Q92611 657 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 CHFRQ96EP1 664 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 SLC39A13Q96H72 371 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 VCPIP1Q96JH7 1222 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 PDCL3Q9H2J4 239 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 ARHGEF3Q9NR81 526 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 TMEM59LQ9UK28 342 aa17.7■□□□□ 0.42
SCAF11-206ENST00000474828 COL4A3Q01955 1670 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 GFRA2O00451 464 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 LATS1O95835 1130 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 EFEMP1Q12805 493 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 MLF2Q15773 248 aaPredicted RBP17.69■□□□□ 0.42
SCAF11-206ENST00000474828 ITPRIPL2Q3MIP1 535 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 SYPL2Q5VXT5 272 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 CC2D1AQ6P1N0 951 aaPredicted RBP17.69■□□□□ 0.42
SCAF11-206ENST00000474828 C1orf228Q6PIY5 440 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 WDR59Q6PJI9 974 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 DQX1Q8TE96 717 aaKnown RBP17.69■□□□□ 0.42
SCAF11-206ENST00000474828 RNF139Q8WU17 664 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 GOLGA1Q92805 767 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 ATP2A3Q93084 1043 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 AZIN2Q96A70 460 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 PLD4Q96BZ4 506 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 ZFYVE19Q96K21 471 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 DCLK3Q9C098 648 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 NACA2Q9H009 215 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 LINC00597Q9H2U6 94 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 C8orf33Q9H7E9 229 aaPredicted RBP17.69■□□□□ 0.42
SCAF11-206ENST00000474828 TMEM51Q9NW97 253 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 DUS2Q9NX74 493 aaKnown RBP17.69■□□□□ 0.42
SCAF11-206ENST00000474828 WDR35Q9P2L0 1181 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms