RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SLC30A4O14863 429 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 DCLK1O15075 740 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 P4HA2O15460 535 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 TNFRSF4P43489 277 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 YWHAEP62258 255 aaKnown RBP15.91■□□□□ 0.14
VARS-223ENST00000474643 PLK5Q496M5 336 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 C10orf76Q5T2E6 689 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 SDE2Q6IQ49 451 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 RSRC2Q7L4I2 434 aaKnown RBP15.91■□□□□ 0.14
VARS-223ENST00000474643 TXNDC5Q8NBS9 432 aaKnown RBP15.91■□□□□ 0.14
VARS-223ENST00000474643 ZMIZ2Q8NF64 920 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 WHAMMQ8TF30 809 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 TATDN2Q93075 761 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 FAXDC2Q96IV6 333 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 TWNKQ96RR1 684 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 BBS2Q9BXC9 721 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 PNPLA8Q9NP80 782 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 VPS45Q9NRW7 570 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 IL37Q9NZH6 218 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 DNMT3LQ9UJW3 386 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 COQ4Q9Y3A0 265 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 RALGAPA1Q6GYQ0 2036 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 A0A1W2PQH9 124 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 FAM92AA1XBS5 289 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 GDF9O60383 454 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 CILPO75339 1184 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 ZDHHC11BP0C7U3 371 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 ZNF806P0C7X5 589 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 RARGP13631 454 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
VARS-223ENST00000474643 TBXAS1P24557 533 aaPredicted RBP15.9■□□□□ 0.14
VARS-223ENST00000474643 PSEN1P49768 467 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 BYSLQ13895 437 aaKnown RBP15.9■□□□□ 0.14
VARS-223ENST00000474643 CRY1Q16526 586 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 PPM1JQ5JR12 505 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 GRAMD4Q6IC98 578 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 TPGS1Q6ZTW0 290 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 GPRIN1Q7Z2K8 1008 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 C12orf40Q86WS4 652 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 MIB1Q86YT6 1006 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 PPM1KQ8N3J5 372 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 ZNF513Q8N8E2 541 aaPredicted RBP15.9■□□□□ 0.14
VARS-223ENST00000474643 HMGB4Q8WW32 186 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 ZC3H10Q96K80 434 aaKnown RBP15.9■□□□□ 0.14
VARS-223ENST00000474643 ZFRQ96KR1 1074 aaKnown RBP15.9■□□□□ 0.14
VARS-223ENST00000474643 MED15Q96RN5 788 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 CISHQ9NSE2 258 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 DNAJC17Q9NVM6 304 aaKnown RBP15.9■□□□□ 0.14
VARS-223ENST00000474643 WDR35Q9P2L0 1181 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 MYO16Q9Y6X6 1858 aa15.9■□□□□ 0.14
VARS-223ENST00000474643 TCRBV21S2A2A0A5A6 115 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 HOXC11O43248 304 aaPredicted RBP15.89■□□□□ 0.13
VARS-223ENST00000474643 TULP3O75386 442 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 CAVIN2O95810 425 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 TBX18O95935 607 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 DHPSP49366 369 aaPredicted RBP15.89■□□□□ 0.13
VARS-223ENST00000474643 CUL2Q13617 745 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 PPP1R26Q5T8A7 1209 aaPredicted RBP15.89■□□□□ 0.13
VARS-223ENST00000474643 CYP2U1Q7Z449 544 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 ARHGAP18Q8N392 663 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 BHMTQ93088 406 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 TMEM176AQ96HP8 235 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 ARID3AQ99856 593 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 DUSP16Q9BY84 665 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 DUSP15Q9H1R2 295 aaPredicted RBP15.89■□□□□ 0.13
VARS-223ENST00000474643 SMOC1Q9H4F8 434 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 ZDHHC4Q9NPG8 344 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 CYLDQ9NQC7 956 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 HESX1Q9UBX0 185 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 RASAL2Q9UJF2 1139 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 STRIP2Q9ULQ0 834 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 NFE2L3Q9Y4A8 694 aa15.89■□□□□ 0.13
VARS-223ENST00000474643 PMM2O15305 246 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 TPM2P07951 284 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 PLA2G4AP47712 749 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 TYRO3Q06418 890 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 MAN2A1Q16706 1144 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 GAB4Q2WGN9 574 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 RNF43Q68DV7 783 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 HTR3DQ70Z44 454 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 LPCAT2Q7L5N7 544 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 TMEM25Q86YD3 366 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 CHPFQ8IZ52 775 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 TERB1Q8NA31 727 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 IL17RCQ8NAC3 791 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 EHBP1Q8NDI1 1231 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 MDGA1Q8NFP4 955 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 ENOX1Q8TC92 643 aaKnown RBP15.88■□□□□ 0.13
VARS-223ENST00000474643 CRACR2AQ9BSW2 395 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 NAT10Q9H0A0 1025 aaKnown RBP15.88■□□□□ 0.13
VARS-223ENST00000474643 INTS2Q9H0H0 1204 aaKnown RBP15.88■□□□□ 0.13
VARS-223ENST00000474643 NUDT5Q9UKK9 219 aa15.88■□□□□ 0.13
VARS-223ENST00000474643 KCNJ18B7U540 433 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 SGK1O00141 431 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 MDM4O15151 490 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 HMBSP08397 361 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 HOXB2P14652 356 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 TYRP14679 529 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 CD19P15391 556 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 KIF11P52732 1056 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms