RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 FAM117BQ6P1L5 589 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 TMEM173Q86WV6 379 aaPredicted RBP20.61■□□□□ 0.89
SSR1-204ENST00000474597 CCDC185Q8N715 623 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 CCDC89Q8N998 374 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 SCAMP5Q8TAC9 235 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 CWH43Q9H720 699 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 CALCOCO1Q9P1Z2 691 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 MTRF1LQ9UGC7 380 aaKnown RBP20.61■□□□□ 0.89
SSR1-204ENST00000474597 FZD10Q9ULW2 581 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 HPCAL4Q9UM19 191 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 MYO16Q9Y6X6 1858 aa20.61■□□□□ 0.89
SSR1-204ENST00000474597 SPDYE4A6NLX3 237 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 APOL1O14791 398 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 ATF2P15336 505 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 ITGB8P26012 769 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 SMARCB1Q12824 385 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 RTP2Q5QGT7 225 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 BSPRYQ5W0U4 402 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 BHLHA9Q7RTU4 235 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 PSTKQ8IV42 348 aaKnown RBP20.6■□□□□ 0.89
SSR1-204ENST00000474597 KRT222Q8N1A0 295 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 CCHCR1Q8TD31 782 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 EDEM1Q92611 657 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 P3H4Q92791 437 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 NKD2Q969F2 451 aaPredicted RBP20.6■□□□□ 0.89
SSR1-204ENST00000474597 LRRC45Q96CN5 670 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 SAE1Q9UBE0 346 aaPredicted RBP20.6■□□□□ 0.89
SSR1-204ENST00000474597 ZNF487B1APH4 448 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 MCF2LO15068 1137 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 KRT14P02533 472 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 ITGAVP06756 1048 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 L1CAMP32004 1257 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 ADCY8P40145 1251 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 MAGEA11P43364 429 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 OTUD1Q5VV17 481 aaPredicted RBP20.6■□□□□ 0.89
SSR1-204ENST00000474597 BNIPLQ7Z465 357 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 BCL7CQ8WUZ0 217 aaPredicted RBP20.6■□□□□ 0.89
SSR1-204ENST00000474597 SNF8Q96H20 258 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 C8orf48Q96LL4 319 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 FAM129AQ9BZQ8 928 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 FAM204AQ9H8W3 233 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 DDIT4Q9NX09 232 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 GRHL1Q9NZI5 618 aa20.6■□□□□ 0.89
SSR1-204ENST00000474597 SGK1O00141 431 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 TNFRSF10BO14763 440 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 F9P00740 461 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 ARL4AP40617 200 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 DEFB103AP81534 67 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 OASLQ15646 514 aaKnown RBP20.59■□□□□ 0.89
SSR1-204ENST00000474597 USP41Q3LFD5 358 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 EFHC2Q5JST6 749 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 BTBD8Q5XKL5 378 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 TAS1R1Q7RTX1 841 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 SLC35B2Q8TB61 432 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 ADAM32Q8TC27 787 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 FAM71BQ8TC56 605 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 SPPL2BQ8TCT7 592 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 KCTD15Q96SI1 283 aaPredicted RBP20.59■□□□□ 0.89
SSR1-204ENST00000474597 PIGVQ9NUD9 493 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 WHRNQ9P202 907 aa20.59■□□□□ 0.89
SSR1-204ENST00000474597 ACRP10323 421 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 TGM2P21980 687 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 VPS41P49754 854 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 EIF3EP60228 445 aaKnown RBP20.58■□□□□ 0.89
SSR1-204ENST00000474597 WDR5P61964 334 aaKnown RBP20.58■□□□□ 0.89
SSR1-204ENST00000474597 YWHAGP61981 247 aaKnown RBP eCLIP20.58■□□□□ 0.89
SSR1-204ENST00000474597 GPR17Q13304 367 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 DDR2Q16832 855 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 KIAA1841Q6NSI8 718 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 NUP93Q8N1F7 819 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 MREGQ8N565 214 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 ALLCQ8N6M5 410 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 ATAD1Q8NBU5 361 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 BBOF1Q8ND07 529 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 FBXO25Q8TCJ0 367 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 PGAP3Q96FM1 320 aaPredicted RBP20.58■□□□□ 0.89
SSR1-204ENST00000474597 IGSF21Q96ID5 467 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 SLC9A7Q96T83 725 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 TMEM121Q9BTD3 319 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 FBXO44Q9H4M3 255 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 ABCC13Q9NSE7 274 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 ZDHHC18Q9NUE0 388 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 FAM53CQ9NYF3 392 aa20.58■□□□□ 0.89
SSR1-204ENST00000474597 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.58■□□□□ 0.894e-12■■■■□ 23
SSR1-204ENST00000474597 RRP9O43818 475 aaKnown RBP20.57■□□□□ 0.88
SSR1-204ENST00000474597 ZFXP17010 805 aaPredicted RBP20.57■□□□□ 0.88
SSR1-204ENST00000474597 ITIH2P19823 946 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 IL4RP24394 825 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 AIF1P55008 147 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 BTG3Q14201 252 aaPredicted RBP20.57■□□□□ 0.88
SSR1-204ENST00000474597 ARL13BQ3SXY8 428 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 MGAT5BQ3V5L5 792 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 C1orf228Q6PIY5 440 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 KCNT2Q6UVM3 1135 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 BEND5Q7L4P6 421 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 TSEN2Q8NCE0 465 aaKnown RBP20.57■□□□□ 0.88
SSR1-204ENST00000474597 C2orf15Q8WU43 125 aaKnown RBP20.57■□□□□ 0.88
SSR1-204ENST00000474597 RSAD2Q8WXG1 361 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 FAF2Q96CS3 445 aa20.57■□□□□ 0.88
SSR1-204ENST00000474597 ZNF689Q96CS4 500 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms