RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 FYTTD1Q96QD9 318 aaKnown RBP4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 TRMT13Q9NUP7 481 aaKnown RBP4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 HEY2Q9UBP5 337 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 DAAM1Q9Y4D1 1078 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 COMMD10Q9Y6G5 202 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 SQORQ9Y6N5 450 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 A0A1W2PPC4 97 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 FAM90A10PA6NDY2 464 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 MBD3L4A6NDZ8 208 aaPredicted RBP4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 MBD3L3A6NE82 208 aaPredicted RBP4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PRR23D1E9PI22 279 aaPredicted RBP4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PYCARD-AS1I3L0S3 204 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 LDHAP00338 332 aaKnown RBP4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 CRYABP02511 175 aaKnown RBP4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PARP1P09874 1014 aaKnown RBP4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PRR23D2P0DMB1 279 aaPredicted RBP4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PSG1P11464 419 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 KLRC1P26715 233 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 THBS3P49746 956 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 LMAN2Q12907 356 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PMS2P11Q13670 270 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 MORC3Q14149 939 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PLA1AQ53H76 456 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PIP4P1Q86T03 277 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 DPP9Q86TI2 863 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 SKAP1Q86WV1 359 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 CCDC33Q8N5R6 958 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 DEPTORQ8TB45 409 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 ZNF398Q8TD17 642 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 BPIFB1Q8TDL5 484 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 KIAA1191Q96A73 305 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 CAMK1GQ96NX5 476 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 STARD7Q9NQZ5 370 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 WWOXQ9NZC7 414 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PAXBP1Q9Y5B6 917 aa4.28□□□□□ -1.72
TMEM50B-208ENST00000474272 PMPCBO75439 489 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 MT-CO3P00414 261 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 MT-ND5P03915 603 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 GKP32189 559 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 SATB1Q01826 763 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 MGAT5BQ3V5L5 792 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 FAM209BQ5JX69 171 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 C10orf62Q5T681 223 aaPredicted RBP4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 HIBCHQ6NVY1 386 aaPredicted RBP4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 SPATA3Q8NHX4 192 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 SNX22Q96L94 193 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 COLEC11Q9BWP8 271 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 MS4A7Q9GZW8 240 aaPredicted RBP4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 CERS4Q9HA82 394 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 A1CFQ9NQ94 594 aaKnown RBP4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 POT1Q9NUX5 634 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 FER1L4A9Z1Z3 1794 aa4.27□□□□□ -1.73
TMEM50B-208ENST00000474272 ABHD14A-ACY1A0A1B0GW23 586 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 BTBD19C9JJ37 291 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 APOL1O14791 398 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 ANXA2P07355 339 aaKnown RBP4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 TXNP10599 105 aaKnown RBP4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 APEHP13798 732 aaKnown RBP4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 FGFR2P21802 821 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 CARSP49589 748 aaKnown RBP4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 DIO1P49895 249 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 WNT3P56703 355 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 OS9Q13438 667 aaPredicted RBP4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 DGKKQ5KSL6 1271 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 TMTC4Q5T4D3 741 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 IZUMO3Q5VZ72 239 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 TMEM65Q6PI78 240 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 ZDHHC24Q6UX98 284 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 UNC13DQ70J99 1090 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 GAS2L3Q86XJ1 694 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 SFTPA1Q8IWL2 248 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 ATP11CQ8NB49 1132 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 SMRP1Q8NCR6 262 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 VPS37AQ8NEZ2 397 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 SPSB4Q96A44 273 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 IQCDQ96DY2 449 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 STK31Q9BXU1 1019 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 CHST8Q9H2A9 424 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 PLCB1Q9NQ66 1216 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 GJB4Q9NTQ9 266 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 MYO1AQ9UBC5 1043 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 PI4KBQ9UBF8 816 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 RGS17Q9UGC6 210 aaPredicted RBP4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 PCDHGB2Q9Y5G2 931 aa4.26□□□□□ -1.73
TMEM50B-208ENST00000474272 GTPBP1O00178 669 aaKnown RBP4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 PSMD9O00233 223 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 TPD52L2O43399 206 aaKnown RBP4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 TLR2O60603 784 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 RNF8O76064 485 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 FGF18O76093 207 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 SETSIPP0DME0 302 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 CYP2C9P11712 490 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 HARSP12081 509 aaKnown RBP4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 ABCB4P21439 1286 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 IL6STP40189 918 aaPredicted RBP4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 YPEL5P62699 121 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 ID2Q02363 134 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 SLC35G1Q2M3R5 365 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms