RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 TMEFF1Q8IYR6 380 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 PHTF2Q8N3S3 785 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 TERB1Q8NA31 727 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 PIGKQ92643 395 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 TMEM176AQ96HP8 235 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 SPACA7Q96KW9 195 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
SMPD4-217ENST00000473720 DUSP16Q9BY84 665 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 CYLDQ9NQC7 956 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 CISHQ9NSE2 258 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 RMND1Q9NWS8 449 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 DNMT3LQ9UJW3 386 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
SMPD4-217ENST00000473720 STX10O60499 249 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 ADRB1P08588 477 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 HOXB2P14652 356 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 GTF2H1P32780 548 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 PLA2G4AP47712 749 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 KIF11P52732 1056 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 EFEMP1Q12805 493 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 LRMPQ12912 555 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 HSF5Q4G112 596 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-217ENST00000473720 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 CBWD3Q5JTY5 395 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 CBWD5Q5RIA9 395 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 EGFLAMQ63HQ2 1017 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 TOGARAM2Q6ZUX3 1019 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
SMPD4-217ENST00000473720 LPCAT2Q7L5N7 544 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 TRMT11Q7Z4G4 463 aaKnown RBP12.57□□□□□ -0.4
SMPD4-217ENST00000473720 FMR1NBQ8N0W7 255 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-217ENST00000473720 SLC4A11Q8NBS3 891 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 DDX1Q92499 740 aaKnown RBP12.57□□□□□ -0.4
SMPD4-217ENST00000473720 SMARCE1Q969G3 411 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMPD4-217ENST00000473720 TMEM131Q92545 1883 aa12.57□□□□□ -0.4
SMPD4-217ENST00000473720 A0A0A0MRY4 1105 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 C4orf47A7E2U8 309 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 KHNYNO15037 678 aaKnown RBP12.56□□□□□ -0.4
SMPD4-217ENST00000473720 GREM1O60565 184 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 STC2O76061 302 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 P2RY2P41231 377 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 DGKGP49619 791 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 LIMK1P53667 647 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 PMS1P54277 932 aaKnown RBP12.56□□□□□ -0.4
SMPD4-217ENST00000473720 RAD23BP54727 409 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 BECN1Q14457 450 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 GOLGA7BQ2TAP0 167 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 UAP1L1Q3KQV9 507 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 ZNF658Q5TYW1 1059 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-217ENST00000473720 SDE2Q6IQ49 451 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 CCDC186Q7Z3E2 898 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 SCD5Q86SK9 330 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 TADA2BQ86TJ2 420 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 C11orf74Q86VG3 221 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 CHPFQ8IZ52 775 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
SMPD4-217ENST00000473720 ACOX2Q99424 681 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 PNPLA8Q9NP80 782 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 WDR35Q9P2L0 1181 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 RAD54BQ9Y620 910 aa12.56□□□□□ -0.4
SMPD4-217ENST00000473720 NYNRINQ9P2P1 1898 aaKnown RBP12.56□□□□□ -0.4
SMPD4-217ENST00000473720 SLC12A8A0AV02 714 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 LNP1A1A4G5 178 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 ZBTB24O43167 697 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-217ENST00000473720 CACNG3O60359 315 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 SMC2O95347 1197 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-217ENST00000473720 CD19P15391 556 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 GABRG2P18507 467 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 NTSR1P30989 418 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 CORO1AP31146 461 aaKnown RBP12.55□□□□□ -0.4
SMPD4-217ENST00000473720 PTGER3P43115 390 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 PSEN1P49768 467 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 TKTL1P51854 596 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 SLC8A3P57103 927 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 IRX4P78413 519 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 ENPEPQ07075 957 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 N4BP2L1Q5TBK1 243 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-217ENST00000473720 PSAPL1Q6NUJ1 521 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 PIGZQ86VD9 579 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 OLIG1Q8TAK6 271 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 GSDMAQ96QA5 445 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 SLC6A17Q9H1V8 727 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 MBD1Q9UIS9 605 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-217ENST00000473720 PCNX2A6NKB5 2137 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 NUMA1Q14980 2115 aa12.55□□□□□ -0.4
SMPD4-217ENST00000473720 NCOR2Q9Y618 2525 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 WASH3PC4AMC7 463 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 PRRT4C9JH25 899 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 TULP2O00295 520 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 YWHAGP61981 247 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMPD4-217ENST00000473720 COG7P83436 770 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
SMPD4-217ENST00000473720 RPL6Q02878 288 aaKnown RBP12.54□□□□□ -0.4
SMPD4-217ENST00000473720 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
SMPD4-217ENST00000473720 CCDC40Q4G0X9 1142 aa12.54□□□□□ -0.4
SMPD4-217ENST00000473720 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms