RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CNTNAP3Q9BZ76 1288 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 UBXN6Q9BZV1 441 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 DCLK3Q9C098 648 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 PDCL3Q9H2J4 239 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 SPHK2Q9NRA0 654 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 OSER1Q9NX31 292 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 MARCH2Q9P0N8 246 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 DEC1Q9P2X7 70 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 SMG5Q9UPR3 1016 aaKnown RBP12.09□□□□□ -0.47
CPNE1-222ENST00000473373 ZNF510Q9Y2H8 683 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 CEP192Q8TEP8 1941 aa12.09□□□□□ -0.47
CPNE1-222ENST00000473373 TBC1D3BA6NDS4 549 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 TULP2O00295 520 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 O00370 1275 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 CALCAP01258 141 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 ERCC5P28715 1186 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 CORO1AP31146 461 aaKnown RBP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 TIE1P35590 1138 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 PXNP49023 591 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 PGFP49763 221 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 SIM2Q14190 667 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 GAS6Q14393 721 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 CNGA2Q16280 664 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 KLHDC10Q6PID8 442 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 TRIM65Q6PJ69 517 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 LCLAT1Q6UWP7 414 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 LONP2Q86WA8 852 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 CCDC33Q8N5R6 958 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 NDRG1Q92597 394 aaKnown RBP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 EDEM1Q92611 657 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 FAM149B1Q96BN6 582 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 ZFRQ96KR1 1074 aaKnown RBP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 TUBGCP2Q9BSJ2 902 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 MIS12Q9H081 205 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 FBRSL1Q9HCM7 1045 aaKnown RBP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 DNAJC17Q9NVM6 304 aaKnown RBP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 BCCIPQ9P287 314 aaKnown RBP eCLIP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 APEX2Q9UBZ4 518 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.08□□□□□ -0.48
CPNE1-222ENST00000473373 USP3Q9Y6I4 520 aa12.08□□□□□ -0.48
CPNE1-222ENST00000473373 KCNJ18B7U540 433 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 RNF225M0QZC1 329 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-222ENST00000473373 CAPN9O14815 690 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 ZBTB24O43167 697 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-222ENST00000473373 KAT7O95251 611 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 MBD3O95983 291 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 SLC9A1P19634 815 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 OPRD1P41143 372 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 EIF2DP41214 584 aaKnown RBP12.07□□□□□ -0.48
CPNE1-222ENST00000473373 SLC6A11P48066 632 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 HARS2P49590 506 aaKnown RBP12.07□□□□□ -0.48
CPNE1-222ENST00000473373 DGKEP52429 567 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 RAPGEF1Q13905 1077 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 KCNJ12Q14500 433 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 DMC1Q14565 340 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 RAB41Q5JT25 222 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 SDE2Q6IQ49 451 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 PKN3Q6P5Z2 889 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 GJB7Q6PEY0 223 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 MAMSTRQ6ZN01 415 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 CLEC17AQ6ZS10 378 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 HTR3DQ70Z44 454 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 SCD5Q86SK9 330 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 TMEM25Q86YD3 366 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 DENND1CQ8IV53 801 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 FMNL3Q8IVF7 1028 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 PGBD3Q8N328 593 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 ZBTB44Q8NCP5 570 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 TSTD1Q8NFU3 115 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 LMO3Q8TAP4 145 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 TFAP2BQ92481 460 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 PCMTD1Q96MG8 357 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-222ENST00000473373 KREMEN1Q96MU8 473 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 CNGB3Q9NQW8 809 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 ABCC13Q9NSE7 274 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 WDR35Q9P2L0 1181 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 CEP83Q9Y592 693 aa12.07□□□□□ -0.48
CPNE1-222ENST00000473373 DNAH14Q0VDD8 3507 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 STC2O76061 302 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 ALDH1A2O94788 518 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 FBXO21O94952 628 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 KLF8O95600 359 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-222ENST00000473373 TYRP14679 529 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 CNR2P34972 360 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 CHKAP35790 457 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 GRIA2P42262 883 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 ACADSBP45954 432 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 ARID5AQ03989 594 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 PTK2Q05397 1052 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 VWA3BQ502W6 1294 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 C10orf76Q5T2E6 689 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 BSPRYQ5W0U4 402 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 C12orf40Q86WS4 652 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 UBR7Q8N806 425 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 KCTD13Q8WZ19 329 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 WBP2Q969T9 261 aa12.06□□□□□ -0.48
CPNE1-222ENST00000473373 PLD4Q96BZ4 506 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms