RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ASNSD1Q9NWL6 643 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 CAPN14A8MX76 684 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 CLGNO14967 610 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 STAG3L1P0CL83 205 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 VGLL4Q14135 290 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 CHI3L2Q15782 390 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 FAM91A1Q658Y4 838 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 NETO2Q8NC67 525 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 PPFIBP2Q8ND30 876 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 RBM15BQ8NDT2 890 aaKnown RBP21.9■■□□□ 1.1
COL18A1-207ENST00000473212 SMC1BQ8NDV3 1235 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 TSC22D3Q99576 134 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 RNPEPQ9H4A4 650 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 KDSRQ06136 332 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 PLD5Q8N7P1 536 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.9■■□□□ 1.1
COL18A1-207ENST00000473212 TEKT4Q8WW24 435 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 FGD4Q96M96 766 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 SPATC1LQ9H0A9 340 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 VCXQ9H320 206 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 POPDC2Q9HBU9 364 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 NGRNQ9NPE2 291 aaKnown RBP21.9■■□□□ 1.1
COL18A1-207ENST00000473212 PDGFCQ9NRA1 345 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 KRT82Q9NSB4 513 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 DNAH12Q6ZR08 3092 aa21.9■■□□□ 1.1
COL18A1-207ENST00000473212 MYO18AQ92614 2054 aaKnown RBP21.9■■□□□ 1.1
COL18A1-207ENST00000473212 C2CD4BA6NLJ0 364 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 A8MXQ7 604 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 RFPL1O75677 317 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 APRTP07741 180 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 GRIA1P42261 906 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 RAP1GDS1P52306 607 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 ZNF143P52747 638 aaPredicted RBP21.89■■□□□ 1.1
COL18A1-207ENST00000473212 NDST1P52848 882 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 ATXN1P54253 815 aaKnown RBP21.89■■□□□ 1.1
COL18A1-207ENST00000473212 RNF220Q5VTB9 566 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 TRMT10BQ6PF06 316 aaKnown RBP21.89■■□□□ 1.1
COL18A1-207ENST00000473212 CAND1Q86VP6 1230 aaKnown RBP21.89■■□□□ 1.1
COL18A1-207ENST00000473212 TMPRSS6Q8IU80 811 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 KBTBD2Q8IY47 623 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 PQLC3Q8N755 202 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 CLPTM1LQ96KA5 538 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 C7orf26Q96N11 449 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 PAK5Q9P286 719 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 ZNF212Q9UDV6 495 aa21.89■■□□□ 1.1
COL18A1-207ENST00000473212 MAP3K7O43318 606 aa21.89■■□□□ 1.09
COL18A1-207ENST00000473212 ENDOD1O94919 500 aa21.89■■□□□ 1.09
COL18A1-207ENST00000473212 MYCNP04198 464 aaPredicted RBP21.89■■□□□ 1.09
COL18A1-207ENST00000473212 ZRSR2Q15696 482 aaKnown RBP21.89■■□□□ 1.09
COL18A1-207ENST00000473212 ATG16L1Q676U5 607 aa21.89■■□□□ 1.09
COL18A1-207ENST00000473212 MPP5Q8N3R9 675 aa21.89■■□□□ 1.09
COL18A1-207ENST00000473212 SPATA33Q96N06 139 aa21.89■■□□□ 1.09
COL18A1-207ENST00000473212 PIDD1Q9HB75 910 aa21.89■■□□□ 1.09
COL18A1-207ENST00000473212 FESP07332 822 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 PFKMP08237 780 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 GPD1P21695 349 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 OSBPP22059 807 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 YY1P25490 414 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 AQP5P55064 265 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 OR52E8Q6IFG1 317 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 NUDCD3Q8IVD9 361 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 B3GNT5Q9BYG0 378 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 PPP1R12CQ9BZL4 782 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 IFT122Q9HBG6 1241 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 SLC17A6Q9P2U8 582 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 SCOCQ9UIL1 159 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 TSPAN16Q9UKR8 245 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 LOC285556D6RIA3 1793 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 HCRTO43612 131 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 MAGEC1O60732 1142 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 TFDP2Q14188 446 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 ACAP1Q15027 740 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 CCDC14Q49A88 953 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 FAM47CQ5HY64 1035 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 RIOX2Q8IUF8 465 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 TRIM42Q8IWZ5 723 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 UNC5BQ8IZJ1 945 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 PHC3Q8NDX5 983 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.88■■□□□ 1.091e-9■□□□□ 9.9
COL18A1-207ENST00000473212 PCDH19Q8TAB3 1148 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 RNF157Q96PX1 679 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 C20orf27Q9GZN8 174 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 PCMTD2Q9NV79 361 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 ZNF180Q9UJW8 692 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 PPME1Q9Y570 386 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 ASB3Q9Y575 518 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 WDR90Q96KV7 1748 aa21.88■■□□□ 1.09
COL18A1-207ENST00000473212 KIF3CO14782 793 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 USP2O75604 605 aaPredicted RBP21.87■■□□□ 1.09
COL18A1-207ENST00000473212 CSH1P0DML2 217 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 CSH2P0DML3 217 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 GABRB2P47870 512 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 ALDH18A1P54886 795 aaKnown RBP21.87■■□□□ 1.09
COL18A1-207ENST00000473212 KRT81Q14533 505 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 SLC10A6Q3KNW5 377 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 TEX44Q53QW1 395 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 PPP6R3Q5H9R7 873 aaPredicted RBP21.87■■□□□ 1.09
COL18A1-207ENST00000473212 GADL1Q6ZQY3 521 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 SCUBE1Q8IWY4 988 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 TXNRD2Q9NNW7 524 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms