RNA–Protein interactions for RNA: ENST00000473195.5

TRAIP-203, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-203ENST00000473195 HOXC11O43248 304 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-203ENST00000473195 CALCAP01258 141 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 ZNF806P0C7X5 589 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
TRAIP-203ENST00000473195 TRIM21P19474 475 aaKnown RBP12.74□□□□□ -0.37
TRAIP-203ENST00000473195 GTF2H1P32780 548 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 GRIA2P42262 883 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 PPM1JQ5JR12 505 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 C10orf120Q5SQS8 335 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 C10orf76Q5T2E6 689 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 BTBD8Q5XKL5 378 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 HTR3DQ70Z44 454 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 TERB1Q8NA31 727 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 HMGB4Q8WW32 186 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 SMARCE1Q969G3 411 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 OTUB2Q96DC9 234 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 TMEM176AQ96HP8 235 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 LOXL4Q96JB6 756 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
TRAIP-203ENST00000473195 ACOX2Q99424 681 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 TSG101Q99816 390 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 BBS2Q9BXC9 721 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
TRAIP-203ENST00000473195 RMND1Q9NWS8 449 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 DEC1Q9P2X7 70 aa12.74□□□□□ -0.37
TRAIP-203ENST00000473195 A0A0A0MRY4 1105 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 TCRBV21S2A2A0A5A6 115 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 PATE3B3GLJ2 98 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 GADD45BO75293 160 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-203ENST00000473195 STC2O76061 302 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 TYRP14679 529 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 TNFRSF4P43489 277 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 MCCD1P59942 119 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-203ENST00000473195 ENPEPQ07075 957 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 EFEMP1Q12805 493 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 ELF2Q15723 593 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 GOLGA7BQ2TAP0 167 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 USP39Q53GS9 565 aaKnown RBP12.73□□□□□ -0.37
TRAIP-203ENST00000473195 EGFLAMQ63HQ2 1017 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 PMS2CLQ68D20 193 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 ARMCX6Q7L4S7 300 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 CCDC186Q7Z3E2 898 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 PIGZQ86VD9 579 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 ZC3H3Q8IXZ2 948 aaKnown RBP12.73□□□□□ -0.37
TRAIP-203ENST00000473195 PGBD3Q8N328 593 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 DEFB119Q8N690 84 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 ZNF513Q8N8E2 541 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-203ENST00000473195 GSDMAQ96QA5 445 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 PNPLA8Q9NP80 782 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 BCCIPQ9P287 314 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAIP-203ENST00000473195 DNMT3LQ9UJW3 386 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 LSM7Q9UK45 103 aaKnown RBP12.73□□□□□ -0.37
TRAIP-203ENST00000473195 MAN1B1Q9UKM7 699 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 USP3Q9Y6I4 520 aa12.73□□□□□ -0.37
TRAIP-203ENST00000473195 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
TRAIP-203ENST00000473195 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
TRAIP-203ENST00000473195 PRRT4C9JH25 899 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 RHOBTB1O94844 696 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 CAVIN2O95810 425 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 KLKB1P03952 638 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 PLA2G4AP47712 749 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 DHPSP49366 369 aaPredicted RBP12.72□□□□□ -0.37
TRAIP-203ENST00000473195 EOGTQ5NDL2 527 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 GRAMD4Q6IC98 578 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 KLHL10Q6JEL2 608 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 Q6ZNB5 142 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 TMEFF1Q8IYR6 380 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 CCDC26Q8TAB7 109 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 SPATA20Q8TB22 786 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 UBA3Q8TBC4 463 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 SLC6A17Q9H1V8 727 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 POLMQ9NP87 494 aaPredicted RBP12.72□□□□□ -0.37
TRAIP-203ENST00000473195 CD93Q9NPY3 652 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 MBD1Q9UIS9 605 aaPredicted RBP12.72□□□□□ -0.37
TRAIP-203ENST00000473195 TSPAN16Q9UKR8 245 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 RAD54BQ9Y620 910 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 CKAP5Q14008 2032 aa12.72□□□□□ -0.37
TRAIP-203ENST00000473195 NYNRINQ9P2P1 1898 aaKnown RBP12.72□□□□□ -0.37
TRAIP-203ENST00000473195 TP53BP1Q12888 1972 aaPredicted RBP12.71□□□□□ -0.37
TRAIP-203ENST00000473195 BCLAF3A2AJT9 711 aaKnown RBP12.71□□□□□ -0.37
TRAIP-203ENST00000473195 PIK3R2O00459 728 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 BIN1O00499 593 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 SLC16A3O15427 465 aaKnown RBP12.71□□□□□ -0.37
TRAIP-203ENST00000473195 STX10O60499 249 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 ALDH1A2O94788 518 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 SMC2O95347 1197 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 RALAP11233 206 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 HOXB2P14652 356 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 CD19P15391 556 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 GABRG2P18507 467 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 BMP6P22004 513 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 TKTL1P51854 596 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 YWHAGP61981 247 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAIP-203ENST00000473195 FKBP3Q00688 224 aaKnown RBP12.71□□□□□ -0.37
TRAIP-203ENST00000473195 PDE4CQ08493 712 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 GOLGA8FQ08AF8 430 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 GOLGA8DPQ0D2H9 430 aa12.71□□□□□ -0.37
TRAIP-203ENST00000473195 CUL2Q13617 745 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms