RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
TPM3-216ENST00000473036 PCDHB18PQ96TA0 734 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 DDX23Q9BUQ8 820 aaKnown RBP13.76□□□□□ -0.21
TPM3-216ENST00000473036 OSBPL6Q9BZF3 934 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 LHX5Q9H2C1 402 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 EBF3Q9H4W6 596 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 BRD9Q9H8M2 597 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 KIF9Q9HAQ2 790 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 LRRC4Q9HBW1 653 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 TRPV5Q9NQA5 729 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 CLIC5Q9NZA1 410 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 FBXO4Q9UKT5 387 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 MTF2Q9Y483 593 aaPredicted RBP13.76□□□□□ -0.21
TPM3-216ENST00000473036 WNT6Q9Y6F9 365 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 A0A1W2PQC6 194 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 MED19A0JLT2 244 aaPredicted RBP13.75□□□□□ -0.21
TPM3-216ENST00000473036 DPYSL4O14531 572 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 MED7O43513 233 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 SERPINC1P01008 464 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 ERBB2P04626 1255 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 GLULP15104 373 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 CDH5P33151 784 aaPredicted RBP13.75□□□□□ -0.21
TPM3-216ENST00000473036 SLC8A3P57103 927 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 FMO1Q01740 532 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 FZD5Q13467 585 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 MLF2Q15773 248 aaPredicted RBP13.75□□□□□ -0.21
TPM3-216ENST00000473036 GAB4Q2WGN9 574 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 EML3Q32P44 896 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 PTPN20Q4JDL3 420 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 ARHGAP29Q52LW3 1261 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 BSPRYQ5W0U4 402 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 TXNDC11Q6PKC3 985 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 GAS2L3Q86XJ1 694 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 PJA1Q8NG27 643 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 STK32AQ8WU08 396 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 EDEM1Q92611 657 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 DNASE1L2Q92874 299 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 IRF7Q92985 503 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 HINFPQ9BQA5 517 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 FOXQ1Q9C009 403 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 MIS12Q9H081 205 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 CNGB3Q9NQW8 809 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 IFNKQ9P0W0 207 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 CFAP97Q9P2B7 532 aa13.75□□□□□ -0.21
TPM3-216ENST00000473036 MIA3Q5JRA6 1907 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 KLKB1P03952 638 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 IRF1P10914 325 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 ATP5C1P36542 298 aaKnown RBP13.74□□□□□ -0.21
TPM3-216ENST00000473036 UBASH3AP57075 661 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 PRKCQQ04759 706 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 C2CD6Q53TS8 623 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 C10orf120Q5SQS8 335 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 KLHDC10Q6PID8 442 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 IRF2BP2Q7Z5L9 587 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 YAF2Q8IY57 180 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 SIX6OS1Q8N1H7 587 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 SUMF1Q8NBK3 374 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 OSCP1Q8WVF1 389 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 SYT11Q9BT88 431 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 XPO4Q9C0E2 1151 aaKnown RBP13.74□□□□□ -0.21
TPM3-216ENST00000473036 RBSNQ9H1K0 784 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 ST7Q9NRC1 585 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 R4GN57 208 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
TPM3-216ENST00000473036 KMT2BQ9UMN6 2715 aaPredicted RBP13.73□□□□□ -0.21
TPM3-216ENST00000473036 CACNA1BQ00975 2339 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 KRT9P35527 623 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 STAT1P42224 750 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 PSEN1P49768 467 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 PDE6CP51160 858 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 BPIFB4P59827 614 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 NOMO3P69849 1222 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 PITX1P78337 314 aaPredicted RBP13.73□□□□□ -0.21
TPM3-216ENST00000473036 PFKPQ01813 784 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 EFEMP1Q12805 493 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 SARM1Q6SZW1 724 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 TPRG1Q6ZUI0 275 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 FAM183BPQ6ZVS7 135 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 BBS7Q8IWZ6 715 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 ADGRG2Q8IZP9 1017 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 IRGQQ8WZA9 623 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 PPP1R13BQ96KQ4 1090 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 ADAM33Q9BZ11 813 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 FBRSL1Q9HCM7 1045 aaKnown RBP13.73□□□□□ -0.21
TPM3-216ENST00000473036 DUS2Q9NX74 493 aaKnown RBP13.73□□□□□ -0.21
TPM3-216ENST00000473036 SFMBT1Q9UHJ3 866 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 DNMT3LQ9UJW3 386 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 NAALADL1Q9UQQ1 740 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 PIAS3Q9Y6X2 628 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 ATG2BQ96BY7 2078 aa13.73□□□□□ -0.21
TPM3-216ENST00000473036 ANTXRLA6NF34 631 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 LRRC53A6NM62 1247 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 PRR5-ARHGAP8B1AHC4 643 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 MSI1O43347 362 aaKnown RBP13.72□□□□□ -0.21
TPM3-216ENST00000473036 STC2O76061 302 aa13.72□□□□□ -0.21
TPM3-216ENST00000473036 CYP1A1P04798 512 aaPredicted RBP13.72□□□□□ -0.21
TPM3-216ENST00000473036 DCNP07585 359 aaKnown RBP13.72□□□□□ -0.21
TPM3-216ENST00000473036 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
TPM3-216ENST00000473036 ARHGAP8P85298 464 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms