RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 DQX1Q8TE96 717 aaKnown RBP20.05■□□□□ 0.8
PSPC1-203ENST00000471658 FNIP1Q8TF40 1166 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 NPY6RQ99463 290 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 CNPY3Q9BT09 278 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 PIDD1Q9HB75 910 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 CLDND1Q9NY35 253 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 SFMBT1Q9UHJ3 866 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 ALG6Q9Y672 507 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 SYNJ2BP-COX16A0A087WUM0 186 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 MOSPD3O75425 235 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 FTCDO95954 541 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 TCF4P15884 667 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 COMTP21964 271 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 EPHA5P54756 1037 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 IFI16Q16666 785 aaKnown RBP20.05■□□□□ 0.8
PSPC1-203ENST00000471658 CTC1Q2NKJ3 1217 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 SLC25A52Q3SY17 297 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 SNX30Q5VWJ9 437 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 TAC4Q86UU9 113 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 SLC35F6Q8N357 371 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 CMASQ8NFW8 434 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-203ENST00000471658 NT5C3BQ969T7 300 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 ATXN3LQ9H3M9 355 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 CLIC5Q9NZA1 410 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 COX16Q9P0S2 106 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 ESPNB1AK53 854 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 KIF5CO60282 957 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 TLR5O60602 858 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 TBX10O75333 385 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 PAPLNO95428 1278 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 RALAP11233 206 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 PTPN9P43378 593 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 PSEN1P49768 467 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 GNG11P61952 73 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 STXBP5Q5T5C0 1151 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 TXNDC8Q6A555 127 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 RSRC2Q7L4I2 434 aaKnown RBP20.04■□□□□ 0.8
PSPC1-203ENST00000471658 BEND5Q7L4P6 421 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 SLFN11Q7Z7L1 901 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 SHKBP1Q8TBC3 707 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 RNF139Q8WU17 664 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 FAM172AQ8WUF8 416 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 GUCD1Q96NT3 240 aa20.04■□□□□ 0.8
PSPC1-203ENST00000471658 M0QYT0 321 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 POU2F2P09086 479 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 LTBRP36941 435 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 EFEMP1Q12805 493 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 NME3Q13232 169 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 PIGHQ14442 188 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-203ENST00000471658 CCDC85BQ15834 202 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-203ENST00000471658 PABPC1LQ4VXU2 614 aaKnown RBP20.03■□□□□ 0.8
PSPC1-203ENST00000471658 C10orf120Q5SQS8 335 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 HECTD3Q5T447 861 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 C11orf63Q6NUN7 778 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 CC2D1AQ6P1N0 951 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-203ENST00000471658 PDZD4Q76G19 769 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-203ENST00000471658 DEFB123Q8N688 67 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 CENPIQ92674 756 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-203ENST00000471658 C16orf45Q96MC5 204 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-203ENST00000471658 WDR24Q96S15 920 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 SLC22A12Q96S37 553 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 CYP2S1Q96SQ9 504 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 RNF38Q9H0F5 515 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 TRPC7Q9HCX4 862 aa20.03■□□□□ 0.8
PSPC1-203ENST00000471658 MSI1O43347 362 aaKnown RBP20.02■□□□□ 0.8
PSPC1-203ENST00000471658 COCHO43405 550 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 NCK2O43639 380 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 LRCH4O75427 683 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 TRUB2O95900 331 aaKnown RBP20.02■□□□□ 0.8
PSPC1-203ENST00000471658 TNNT1P13805 278 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 PPP3CCP48454 512 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 HDAC4P56524 1084 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 TAS2R40P59535 323 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 PRSS36Q5K4E3 855 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 POTEHQ6S545 545 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 NYAP1Q6ZVC0 841 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 BNIPLQ7Z465 357 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 GPR149Q86SP6 731 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 NIPA2Q8N8Q9 360 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 DDIT4Q9NX09 232 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 RASAL2Q9UJF2 1139 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 STAP1Q9ULZ2 295 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 PACSIN2Q9UNF0 486 aaPredicted RBP20.02■□□□□ 0.8
PSPC1-203ENST00000471658 NOTCH4Q99466 2003 aa20.02■□□□□ 0.8
PSPC1-203ENST00000471658 SRGAP2BP0DMP2 458 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 CDC25CP30307 473 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 SSR1P43307 286 aaKnown RBP20.02■□□□□ 0.79
PSPC1-203ENST00000471658 GPR153Q6NV75 609 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 MSANTD2Q6P1R3 559 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 NT5DC3Q86UY8 548 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 MIB1Q86YT6 1006 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 TRIM58Q8NG06 486 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 ITFG1Q8TB96 612 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 MRPS31Q92665 395 aaKnown RBP20.02■□□□□ 0.79
PSPC1-203ENST00000471658 CALR3Q96L12 384 aaKnown RBP20.02■□□□□ 0.79
PSPC1-203ENST00000471658 ALS2CR12Q96Q35 445 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 TRIM62Q9BVG3 475 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 S1PR5Q9H228 398 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 FAM204AQ9H8W3 233 aa20.02■□□□□ 0.79
PSPC1-203ENST00000471658 PIGVQ9NUD9 493 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms