RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 RFPL3O75679 317 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 RTN3O95197 1032 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 LDOC1O95751 146 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 OLFM2O95897 454 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 TBX18O95935 607 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 ITGAVP06756 1048 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 HMBSP08397 361 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 PTPN1P18031 435 aaKnown RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 OXTRP30559 389 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 PRPHP41219 470 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 IL12RB1P42701 662 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 NOP14P78316 857 aaKnown RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 GTF2BQ00403 316 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 KCNA1Q09470 495 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 KCNH2Q12809 1159 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 TMEM119Q4V9L6 283 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 SERPINA13PQ6UXR4 307 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 KDM7AQ6ZMT4 941 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 FMNL3Q8IVF7 1028 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 BRSK2Q8IWQ3 736 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 EID2Q8N6I1 236 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 ZNF366Q8N895 744 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 PDZD8Q8NEN9 1154 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 CADM4Q8NFZ8 388 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 MYCBPAPQ8TBZ2 947 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 UCMAQ8WVF2 138 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 KBTBD7Q8WVZ9 684 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 DNASE2BQ8WZ79 361 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 FGF11Q92914 225 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 ACCSQ96QU6 501 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 KCNK16Q96T55 309 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 HNRNPABQ99729 332 aaKnown RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 MRPL45Q9BRJ2 306 aaKnown RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 TTLL2Q9BWV7 592 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 ELOVL4Q9GZR5 314 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 C6orf106Q9H6K1 298 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 CPNE5Q9HCH3 593 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 TM9SF3Q9HD45 589 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 ITM2CQ9NQX7 267 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.28□□□□□ -1.242e-7■■■■■ 33.6
HDAC1-204ENST00000471488 GDAP2Q9NXN4 497 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 NXF1Q9UBU9 619 aaKnown RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 NUDT5Q9UKK9 219 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 PCDHGB2Q9Y5G2 931 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 ERVH48-1M5A8F1 160 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 GABRDO14764 452 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 MDM4O15151 490 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 EPB41L2O43491 1005 aaKnown RBP7.27□□□□□ -1.25
HDAC1-204ENST00000471488 CACNG3O60359 315 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 TLR5O60602 858 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 KIF20AO95235 890 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 DLATP10515 647 aaKnown RBP7.27□□□□□ -1.25
HDAC1-204ENST00000471488 IDEP14735 1019 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 SCP2P22307 547 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 ADSSP30520 456 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 ACSL1P33121 698 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 ABCD1P33897 745 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 ACTN2P35609 894 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 SLC5A3P53794 718 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 ST3GAL1Q11201 340 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 FNDC3BQ53EP0 1204 aaKnown RBP7.27□□□□□ -1.25
HDAC1-204ENST00000471488 HYIQ5T013 277 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 SCARA5Q6ZMJ2 495 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 DPH6Q7L8W6 267 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 LURAP1LQ8IV03 231 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 SPACA3Q8IXA5 215 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 RDH13Q8NBN7 331 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 OR5B17Q8NGF7 314 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 SORCS1Q8WY21 1168 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 RAD54LQ92698 747 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 IGSF8Q969P0 613 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 TMEM176AQ96HP8 235 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 C8orf48Q96LL4 319 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 B3GNT5Q9BYG0 378 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.27□□□□□ -1.25
HDAC1-204ENST00000471488 AASDHPPTQ9NRN7 309 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 TMEM30AQ9NV96 361 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 USP36Q9P275 1121 aaKnown RBP7.27□□□□□ -1.25
HDAC1-204ENST00000471488 SIX4Q9UIU6 781 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 STARD13Q9Y3M8 1113 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 HEMK1Q9Y5R4 338 aaPredicted RBP7.27□□□□□ -1.25
HDAC1-204ENST00000471488 ZNF462Q96JM2 2506 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 ATP8B3O60423 1300 aa7.27□□□□□ -1.25
HDAC1-204ENST00000471488 E9PAM4 449 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 GFRA2O00451 464 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 PHACTR2O75167 634 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 AP1G2O75843 785 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 SEMA4FO95754 770 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 LDHAP00338 332 aaKnown RBP7.26□□□□□ -1.25
HDAC1-204ENST00000471488 DNTTP04053 509 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 TNNI1P19237 187 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 GLDCP23378 1020 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 WARSP23381 471 aaKnown RBP7.26□□□□□ -1.25
HDAC1-204ENST00000471488 PRKCHP24723 683 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 ATP5C1P36542 298 aaKnown RBP7.26□□□□□ -1.25
HDAC1-204ENST00000471488 ZNF131P52739 623 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 BCAT1P54687 386 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 HMGN5P82970 282 aaKnown RBP7.26□□□□□ -1.25
HDAC1-204ENST00000471488 TLE3Q04726 772 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms