RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 ARHGAP18Q8N392 663 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 TTC9BQ8N6N2 239 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 SCAMP5Q8TAC9 235 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 MAIP1Q8WWC4 291 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.29□□□□□ -0.92
LMCD1-207ENST00000470776 OVCA2Q8WZ82 227 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 FAM149B1Q96BN6 582 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 RBM41Q96IZ5 413 aaKnown RBP9.29□□□□□ -0.92
LMCD1-207ENST00000470776 MYRFLQ96LU7 910 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 PEBP4Q96S96 227 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 ABCC13Q9NSE7 274 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 CLIC5Q9NZA1 410 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 EHD2Q9NZN4 543 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 SLC27A5Q9Y2P5 690 aa9.29□□□□□ -0.92
LMCD1-207ENST00000470776 SLC38A8A6NNN8 435 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 C2CD2LO14523 706 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 PRPSAP2O60256 369 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 ARHGEF15O94989 841 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 SEC24AO95486 1093 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 CXCL14O95715 111 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 FGGP02679 453 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 CNPP09543 421 aaKnown RBP9.28□□□□□ -0.92
LMCD1-207ENST00000470776 ATF6P18850 670 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 KDELR1P24390 212 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 YWHAQP27348 245 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 TNFRSF8P28908 595 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 RDXP35241 583 aaKnown RBP9.28□□□□□ -0.92
LMCD1-207ENST00000470776 CETN2P41208 172 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 CXCR3P49682 368 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 DNA2P51530 1060 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 CDR1P51861 262 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 AIF1P55008 147 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 ERVK-21P61565 698 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 YWHAGP61981 247 aaKnown RBP eCLIP9.28□□□□□ -0.92
LMCD1-207ENST00000470776 USP46P62068 366 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 ATP11AP98196 1134 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 KLF1Q13351 362 aaPredicted RBP9.28□□□□□ -0.92
LMCD1-207ENST00000470776 PDK2Q15119 407 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 RAB6CQ53S08 254 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 DCAF6Q58WW2 860 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 AADACL2Q6P093 401 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 CHRDL2Q6WN34 429 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 LEKR1Q6ZMV7 388 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 ANKS1BQ7Z6G8 1248 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 ZDHHC14Q8IZN3 488 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 MRPL43Q8N983 215 aaKnown RBP9.28□□□□□ -0.92
LMCD1-207ENST00000470776 RAPGEF5Q92565 580 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 NTAN1Q96AB6 310 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 KLHL5Q96PQ7 755 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 SLITRK1Q96PX8 696 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 OSBPL8Q9BZF1 889 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 UBE2OQ9C0C9 1292 aaKnown RBP9.28□□□□□ -0.92
LMCD1-207ENST00000470776 RAB6CQ9H0N0 254 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 PRO3102Q9H379 93 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 WDR6Q9NNW5 1121 aaKnown RBP9.28□□□□□ -0.92
LMCD1-207ENST00000470776 NGRNQ9NPE2 291 aaKnown RBP9.28□□□□□ -0.92
LMCD1-207ENST00000470776 SMARCAL1Q9NZC9 954 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 NAALADL1Q9UQQ1 740 aa9.28□□□□□ -0.92
LMCD1-207ENST00000470776 hCG_1818297A0A087WSY0 165 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 M0QYT0 321 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 CAPN9O14815 690 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 SASH3O75995 380 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 SEC31AO94979 1220 aaKnown RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 CSH1P0DML2 217 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 CSH2P0DML3 217 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 NCAM1P13591 858 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 HMGA1P17096 107 aaKnown RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 BMP8BP34820 402 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 CTNNB1P35222 781 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 CDKN2BP42772 138 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 PGFP49763 221 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 SULT1E1P49888 294 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 ERVFC1P60507 584 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 SCAPQ12770 1279 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 NNTQ13423 1086 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 CAMK1Q14012 370 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 CASP8Q14790 479 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 DPYSL2Q16555 572 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 CDO1Q16878 200 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 ERMARDQ5T6L9 678 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 SDHAF4Q5VUM1 108 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 FAM109BQ6ICB4 259 aaPredicted RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 PDE12Q6L8Q7 609 aaKnown RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 MFSD7Q6UXD7 560 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 SPOCD1Q6ZMY3 1216 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 TMC7Q7Z402 723 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 PRELID2Q8N945 189 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 EIF1ADQ8N9N8 165 aaKnown RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 C12orf50Q8NA57 414 aaPredicted RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 NOA1Q8NC60 698 aaKnown RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 PDZD8Q8NEN9 1154 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 DQX1Q8TE96 717 aaKnown RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 AUTS2Q8WXX7 1259 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 FAF2Q96CS3 445 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 TRMT2BQ96GJ1 504 aaKnown RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
LMCD1-207ENST00000470776 HERPUD2Q9BSE4 406 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 C17orf80Q9BSJ5 609 aa9.27□□□□□ -0.93
LMCD1-207ENST00000470776 SNRNP25Q9BV90 132 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms