RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 MATKP42679 507 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 GALCP54803 685 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 ZXDBP98169 803 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 GFPT1Q06210 699 aaPredicted RBP13.21□□□□□ -0.29
SND1-209ENST00000470723 MAMLD1Q13495 774 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 TCEAL1Q15170 157 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 C2CD6Q53TS8 623 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 SYPL2Q5VXT5 272 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 GET4Q7L5D6 327 aaPredicted RBP13.21□□□□□ -0.29
SND1-209ENST00000470723 BNIPLQ7Z465 357 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 LRRC8AQ8IWT6 810 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 ADAMTS19Q8TE59 1207 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 ING5Q8WYH8 240 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 GOLGA1Q92805 767 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 USP13Q92995 863 aaPredicted RBP13.21□□□□□ -0.29
SND1-209ENST00000470723 ELSPBP1Q96BH3 223 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 TRIM11Q96F44 468 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 ZFRQ96KR1 1074 aaKnown RBP13.21□□□□□ -0.29
SND1-209ENST00000470723 UHRF1Q96T88 793 aaPredicted RBP13.21□□□□□ -0.29
SND1-209ENST00000470723 EIF3CQ99613 913 aaKnown RBP13.21□□□□□ -0.29
SND1-209ENST00000470723 C11orf70Q9BRQ4 267 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 PARVAQ9NVD7 372 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 RRN3Q9NYV6 651 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 IGSF9Q9P2J2 1179 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.29
SND1-209ENST00000470723 ARIH1Q9Y4X5 557 aaPredicted RBP13.21□□□□□ -0.29
SND1-209ENST00000470723 VCANP13611 3396 aa13.21□□□□□ -0.3
SND1-209ENST00000470723 C2CD4BA6NLJ0 364 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 GREM1O60565 184 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 CYP1A2P05177 515 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 KRT3P12035 628 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 RRM1P23921 792 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 AVPR1AP37288 418 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 KPNA1P52294 538 aaPredicted RBP13.2□□□□□ -0.3
SND1-209ENST00000470723 GPC5P78333 572 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 COG7P83436 770 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 NNTQ13423 1086 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 HTR4Q13639 388 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 TANGO2Q6ICL3 276 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 MTSS1LQ765P7 747 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 MFSD6LQ8IWD5 586 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 DEFB106AQ8N104 65 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 CELF5Q8N6W0 485 aaKnown RBP13.2□□□□□ -0.3
SND1-209ENST00000470723 TDRD5Q8NAT2 981 aaKnown RBP13.2□□□□□ -0.3
SND1-209ENST00000470723 CENPIQ92674 756 aaPredicted RBP13.2□□□□□ -0.3
SND1-209ENST00000470723 ANP32BQ92688 251 aaKnown RBP13.2□□□□□ -0.3
SND1-209ENST00000470723 AZIN2Q96A70 460 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 PGAP3Q96FM1 320 aaPredicted RBP13.2□□□□□ -0.3
SND1-209ENST00000470723 RPGRIP1Q96KN7 1286 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 LRRC3BQ96PB8 259 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 NPY6RQ99463 290 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 DEF6Q9H4E7 631 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 ZFP14Q9HCL3 533 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 LIMD1Q9UGP4 676 aa13.2□□□□□ -0.3
SND1-209ENST00000470723 HBS1LQ9Y450 684 aaKnown RBP13.2□□□□□ -0.3
SND1-209ENST00000470723 TCF20Q9UGU0 1960 aaKnown RBP13.2□□□□□ -0.3
SND1-209ENST00000470723 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
SND1-209ENST00000470723 MYO16Q9Y6X6 1858 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 TMEM191CA6NGB0 347 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 DAB1O75553 588 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 NDUFA10O95299 355 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 IGLV3-27P01718 113 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 NCAM1P13591 858 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
SND1-209ENST00000470723 CYLC1P35663 651 aaPredicted RBP13.19□□□□□ -0.3
SND1-209ENST00000470723 RING1Q06587 406 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 FCHO2Q0JRZ9 810 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 SLC25A52Q3SY17 297 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 C10orf120Q5SQS8 335 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 FAM102AQ5T9C2 384 aaPredicted RBP13.19□□□□□ -0.3
SND1-209ENST00000470723 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 RAD9BQ6WBX8 426 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 HTR3DQ70Z44 454 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 DDX42Q86XP3 938 aaKnown RBP eCLIP13.19□□□□□ -0.3
SND1-209ENST00000470723 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 RNF139Q8WU17 664 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 EDEM1Q92611 657 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 FGF14Q92915 247 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 FAM149B1Q96BN6 582 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 SLC39A13Q96H72 371 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 PPP1R9BQ96SB3 815 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 SMOC2Q9H3U7 446 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 KCNK12Q9HB15 430 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 MRPL47Q9HD33 250 aaKnown RBP13.19□□□□□ -0.3
SND1-209ENST00000470723 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■■■ 27.2
SND1-209ENST00000470723 MARCH2Q9P0N8 246 aa13.19□□□□□ -0.3
SND1-209ENST00000470723 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 SOWAHDA6NJG2 315 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 CAPN9O14815 690 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 PRAMEF12O95522 483 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 F9P00740 461 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 CKMP06732 381 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 TMEM253P0C7T8 217 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 FLT3P36888 993 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 VIPR2P41587 438 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms