RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CHEK2O96017 543 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ANXA6P08133 673 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PFKMP08237 780 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SERPINF2P08697 491 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CTAGE8P0CG41 777 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PTPRAP18433 802 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CCNE1P24864 410 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 MAPK3P27361 379 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ADSLP30566 484 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 EIF4A3P38919 411 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 IARSP41252 1262 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PRCPP42785 496 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 STARP49675 285 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CASP7P55210 303 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 NLRP11P59045 1033 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ABATP80404 500 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 DSC2Q02487 901 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 KRT17Q04695 432 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PRKCZQ05513 592 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PCDH1Q08174 1060 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ADAM15Q13444 863 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 DCTN2Q13561 401 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ITGA9Q13797 1035 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ZNF268Q14587 947 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 IFI16Q16666 785 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 C21orf62-AS1Q17RA5 79 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ABCB5Q2M3G0 1257 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CNPY1Q3B7I2 92 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 TBRG1Q3YBR2 411 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ZACNQ401N2 412 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 RPS26P11Q5JNZ5 115 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ANKRD20A2Q5SQ80 823 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ANKRD20A1Q5TYW2 823 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 RASIP1Q5U651 963 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ANKRD20A3Q5VUR7 823 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SLC6A19Q695T7 634 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CENPPQ6IPU0 288 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 GDF6Q6KF10 455 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 XRRA1Q6P2D8 792 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ERICH5Q6P6B1 374 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 MEX3BQ6ZN04 569 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 FAM47EQ6ZV65 393 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 STOX1Q6ZVD7 989 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 VN1R5Q7Z5H4 357 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PATL1Q86TB9 770 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CTAGE6Q86UF2 777 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 TMTC1Q8IUR5 882 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 KSR1Q8IVT5 923 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CTAGE4Q8IX94 777 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 FAM133AQ8N9E0 248 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 MLKLQ8NB16 471 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 GMCL1P1Q8NEA9 526 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 TMIEQ8NEW7 156 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ST13P5Q8NFI4 369 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 HUS1BQ8NHY5 278 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 LHFPL5Q8TAF8 219 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SLC2A14Q8TDB8 520 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 TSPEARQ8WU66 669 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SCFD2Q8WU76 684 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 NUDT8Q8WV74 236 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 POF1BQ8WVV4 589 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 RASSF5Q8WWW0 418 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 RUBCNQ92622 972 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ABTB1Q969K4 478 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 EME1Q96AY2 570 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CHMP6Q96FZ7 201 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 TOE1Q96GM8 510 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 TOX2Q96NM4 488 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 RANBP9Q96S59 729 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CRBNQ96SW2 442 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PKP4Q99569 1192 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 RIT2Q99578 217 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SLC29A1Q99808 456 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SH3GL2Q99962 352 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 COL25A1Q9BXS0 654 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SLC26A6Q9BXS9 759 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 DCLK3Q9C098 648 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CCDC86Q9H6F5 360 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 EPS8L2Q9H6S3 715 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ZNF287Q9HBT7 754 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SPON1Q9HCB6 807 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SYTL2Q9HCH5 934 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 NUDT15Q9NV35 164 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 KLHL11Q9NVR0 708 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 POLR3BQ9NW08 1133 aaPredicted RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 WWOXQ9NZC7 414 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PTTG2Q9NZH5 202 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 COX16Q9P0S2 106 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 STK17AQ9UEE5 414 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 IL19Q9UHD0 177 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ENOPH1Q9UHY7 261 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 RCOR1Q9UKL0 485 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 NSFL1CQ9UNZ2 370 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 ZNF175Q9Y473 711 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PTCH2Q9Y6C5 1203 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 LRPPRCP42704 1394 aaKnown RBP5.31□□□□□ -1.56
COL3A1-205ENST00000470167 ELOA3CA0A087WX78 387 aaPredicted RBP5.31□□□□□ -1.56
COL3A1-205ENST00000470167 SH3PXD2BA1X283 911 aa5.31□□□□□ -1.56
COL3A1-205ENST00000470167 RGSL1A5PLK6 1076 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms