RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 RDH13Q8NBN7 331 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 ENGASEQ8NFI3 743 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 DNAJC19Q96DA6 116 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 FGFBP2Q9BYJ0 223 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 ITM2CQ9NQX7 267 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 OLFML3Q9NRN5 406 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 PLK2Q9NYY3 685 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 PCDHGB2Q9Y5G2 931 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 CABIN1Q9Y6J0 2220 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 TLR5O60602 858 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 GJB2P29033 226 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 CSNK1EP49674 416 aaKnown RBP20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 TPMTP51580 245 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 BNC1Q01954 994 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 TRPC3Q13507 836 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 SF3A1Q15459 793 aaKnown RBP20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 USP49Q70CQ1 688 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 METTL3Q86U44 580 aaKnown RBP20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 CACUL1Q86Y37 369 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 BAHD1Q8TBE0 780 aaPredicted RBP20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 PRCCQ92733 491 aaPredicted RBP20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 SIPA1Q96FS4 1042 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 DUSP9Q99956 384 aaKnown RBP20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 TRIM9Q9C026 710 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 DMAP1Q9NPF5 467 aaPredicted RBP20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 PANK4Q9NVE7 773 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 USP36Q9P275 1121 aaKnown RBP20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 BTBD3Q9Y2F9 522 aa20.05■□□□□ 0.8
NCKIPSD-209ENST00000470006 METTL12A8MUP2 240 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 KCNJ18B7U540 433 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 KALRNO60229 2985 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 TBX18O95935 607 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 FAM163BP0C2L3 166 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 TXLNAP40222 546 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 FAM35AQ86V20 835 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 FAM124AQ86V42 546 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 TMPRSS6Q8IU80 811 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 NUP58Q9BVL2 599 aa20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 MKRN2Q9H000 416 aaKnown RBP20.04■□□□□ 0.8
NCKIPSD-209ENST00000470006 TNFSF14O43557 240 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 AP1G2O75843 785 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 CISD3P0C7P0 127 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 HLA-EP13747 358 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 ATP5C1P36542 298 aaKnown RBP20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 CAMK2BQ13554 666 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 LRRC69Q6ZNQ3 347 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 STXBP4Q6ZWJ1 553 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 UCMAQ8WVF2 138 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 CCDC127Q96BQ5 260 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 SMARCD1Q96GM5 515 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 KLF16Q9BXK1 252 aaPredicted RBP20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 KIAA1586Q9HCI6 787 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 TLR8Q9NR97 1041 aaKnown RBP20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 COMMD8Q9NX08 183 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 HSPBP1Q9NZL4 362 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 MARK1Q9P0L2 795 aa20.03■□□□□ 0.8
NCKIPSD-209ENST00000470006 TK2O00142 265 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 PHACTR2O75167 634 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 DKK1O94907 266 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 ZDHHC11BP0C7U3 371 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 AFF3P51826 1226 aaKnown RBP20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 CDH8P55286 799 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 TEAD4Q15561 434 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 DHRS13Q6UX07 377 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 DBX2Q6ZNG2 339 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 ZNF605Q86T29 641 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 FBXO44Q9H4M3 255 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 KRT82Q9NSB4 513 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 SNX11Q9Y5W9 270 aa20.02■□□□□ 0.8
NCKIPSD-209ENST00000470006 KNTC1P50748 2209 aa20.02■□□□□ 0.79
NCKIPSD-209ENST00000470006 PLK4O00444 970 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 ITPKBP27987 946 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 IL12RB1P42701 662 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 GRK6P43250 576 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 PGFP49763 221 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 MYL6P60660 151 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 SMAD1Q15797 465 aaKnown RBP20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 KIF19Q2TAC6 998 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 TNIP3Q96KP6 325 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 PANK2Q9BZ23 570 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 IL37Q9NZH6 218 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 TMEM131Q92545 1883 aa20.01■□□□□ 0.79
NCKIPSD-209ENST00000470006 KCNK3O14649 394 aa20■□□□□ 0.79
NCKIPSD-209ENST00000470006 NPC1O15118 1278 aa20■□□□□ 0.79
NCKIPSD-209ENST00000470006 ZNF132P52740 706 aa20■□□□□ 0.79
NCKIPSD-209ENST00000470006 SNRNP35Q16560 246 aaKnown RBP20■□□□□ 0.79
NCKIPSD-209ENST00000470006 LARP1BQ659C4 914 aaKnown RBP20■□□□□ 0.79
NCKIPSD-209ENST00000470006 CCDC65Q8IXS2 484 aa20■□□□□ 0.79
NCKIPSD-209ENST00000470006 CGRRF1Q99675 332 aa20■□□□□ 0.79
NCKIPSD-209ENST00000470006 SMYD3Q9H7B4 428 aa20■□□□□ 0.79
NCKIPSD-209ENST00000470006 THAP10Q9P2Z0 257 aaPredicted RBP20■□□□□ 0.79
NCKIPSD-209ENST00000470006 ANKRD6Q9Y2G4 727 aa20■□□□□ 0.79
NCKIPSD-209ENST00000470006 AK5Q9Y6K8 562 aa20■□□□□ 0.79
NCKIPSD-209ENST00000470006 ATXN7O15265 892 aaPredicted RBP19.99■□□□□ 0.79
NCKIPSD-209ENST00000470006 GREM1O60565 184 aa19.99■□□□□ 0.79
NCKIPSD-209ENST00000470006 C1QL1O75973 258 aa19.99■□□□□ 0.79
NCKIPSD-209ENST00000470006 JUPP14923 745 aa19.99■□□□□ 0.79
NCKIPSD-209ENST00000470006 STAT6P42226 847 aa19.99■□□□□ 0.79
NCKIPSD-209ENST00000470006 MAP3K7CLP57077 242 aa19.99■□□□□ 0.79
NCKIPSD-209ENST00000470006 SEMG2Q02383 582 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms