RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 FCARP24071 287 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 EIF4A3P38919 411 aaKnown RBP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 PTP4A2Q12974 167 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 PDGFRLQ15198 375 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 ASTE1Q2TB18 679 aaPredicted RBP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 STXBP5Q5T5C0 1151 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 TANGO2Q6ICL3 276 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 ALKBH5Q6P6C2 394 aaKnown RBP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 PARM1Q6UWI2 310 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 FAM183BPQ6ZVS7 135 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 MON1BQ7L1V2 547 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 IRF7Q92985 503 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 AZIN2Q96A70 460 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 SERPINB11Q96P15 392 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 NCAPGQ9BPX3 1015 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 TRMT61BQ9BVS5 477 aaKnown RBP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 KLF16Q9BXK1 252 aaPredicted RBP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 SMOC2Q9H3U7 446 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 CCSER2Q9H7U1 834 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 OSER1Q9NX31 292 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 LCMT1Q9UIC8 334 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 LSM7Q9UK45 103 aaKnown RBP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 SORCS3Q9UPU3 1222 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 NUMBLQ9Y6R0 609 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 DOCK6Q96HP0 2047 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 A0A087X0T9 212 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 HEPACAM2A8MVW5 462 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 PIK3R2O00459 728 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 CHADO15335 359 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 FYNP06241 537 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 FAM228BP0C875 321 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 AMPD2Q01433 879 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 DCAF6Q58WW2 860 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 NUGGCQ68CJ6 796 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 C1orf228Q6PIY5 440 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 HTR3DQ70Z44 454 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 UNC45BQ8IWX7 931 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 SH3RF2Q8TEC5 729 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 NDRG1Q92597 394 aaKnown RBP13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 FGF14Q92915 247 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 PLD4Q96BZ4 506 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 PGAP3Q96FM1 320 aaPredicted RBP13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 SLC22A12Q96S37 553 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 UHRF1Q96T88 793 aaPredicted RBP13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 C11orf70Q9BRQ4 267 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 SLC2A4RGQ9NR83 387 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 TMEM59LQ9UK28 342 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 INTUQ9ULD6 942 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 TLR6Q9Y2C9 796 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 CPQQ9Y646 472 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
SPTLC1-204ENST00000469778 LEFTY2O00292 366 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 NRG2O14511 850 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 ZNF263O14978 683 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 NRDCO43847 1150 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 DAB1O75553 588 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 IPO7O95373 1038 aaKnown RBP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 LATS1O95835 1130 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 TBX18O95935 607 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 SRFP11831 508 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 ALADP13716 330 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 GLULP15104 373 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 CYLC1P35663 651 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 VIPR2P41587 438 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 HARS2P49590 506 aaKnown RBP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 PGFP49763 221 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 GPC5P78333 572 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 EFEMP1Q12805 493 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 SPA17Q15506 151 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 SLC25A52Q3SY17 297 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 CCDC122Q5T0U0 273 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 FAM102AQ5T9C2 384 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 PLEKHA7Q6IQ23 1121 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 DNAJC24Q6P3W2 148 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 POTEHQ6S545 545 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 TXLNBQ8N3L3 684 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 OLIG1Q8TAK6 271 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 CLEC4CQ8WTT0 213 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 EDEM1Q92611 657 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 DNASE1L2Q92874 299 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 MSANTD3Q96H12 275 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 DDX23Q9BUQ8 820 aaKnown RBP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 SELENOOQ9BVL4 669 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 SLC12A6Q9UHW9 1150 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 NENFQ9UMX5 172 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 NAALADL1Q9UQQ1 740 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
SPTLC1-204ENST00000469778 DOCK8Q8NF50 2099 aa13.17□□□□□ -0.3
SPTLC1-204ENST00000469778 LCA5LO95447 670 aa13.17□□□□□ -0.3
SPTLC1-204ENST00000469778 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms