RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 ZNF148Q9UQR1 794 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-205ENST00000469550 TCF20Q9UGU0 1960 aaKnown RBP9.97□□□□□ -0.81
HDAC3-205ENST00000469550 A0A0G2JND7 137 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 E7ESA3 106 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 RFXAPO00287 272 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 STAM2O75886 525 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 ZNF286BP0CG31 522 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 UBA1P22314 1058 aaKnown RBP9.97□□□□□ -0.81
HDAC3-205ENST00000469550 CCND2P30279 289 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 GSTT1P30711 240 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 ICAM3P32942 547 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 PIK3CAP42336 1068 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 ETV4P43268 484 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 RARRES1P49788 294 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 VCPP55072 806 aaKnown RBP9.97□□□□□ -0.81
HDAC3-205ENST00000469550 ERVK-21P61565 698 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 DEFB103AP81534 67 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 ZBTB16Q05516 673 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 MAMLD1Q13495 774 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 OASLQ15646 514 aaKnown RBP9.97□□□□□ -0.81
HDAC3-205ENST00000469550 TCTN1Q2MV58 587 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 SERINC5Q86VE9 423 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 PHF13Q86YI8 300 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-205ENST00000469550 CBWD2Q8IUF1 395 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 GLIS1Q8NBF1 620 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 STKLD1Q8NE28 680 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 ZSWIM2Q8NEG5 633 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 IL31RAQ8NI17 732 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 ARNTL2Q8WYA1 636 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 WNT8BQ93098 351 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 OXNAD1Q96HP4 312 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-205ENST00000469550 OLFM3Q96PB7 478 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 RAD9AQ99638 391 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 IP6K2Q9UHH9 426 aa9.97□□□□□ -0.81
HDAC3-205ENST00000469550 CLUHO75153 1309 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 NCOR1O75376 2440 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 LGR5O75473 907 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 PENKP01210 267 aaPredicted RBP9.96□□□□□ -0.81
HDAC3-205ENST00000469550 ARP10275 920 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 KRT5P13647 590 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 ANPEPP15144 967 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 SERPINB4P48594 390 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 NEK3P51956 506 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 ARL4CP56559 192 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 DSG1Q02413 1049 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 SLC18A2Q05940 514 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 C1QBPQ07021 282 aaKnown RBP9.96□□□□□ -0.81
HDAC3-205ENST00000469550 THOC5Q13769 683 aaKnown RBP9.96□□□□□ -0.81
HDAC3-205ENST00000469550 HNRNPDQ14103 355 aaKnown RBP9.96□□□□□ -0.81
HDAC3-205ENST00000469550 MBTPS1Q14703 1052 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 HIF1AQ16665 826 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 HSDL1Q3SXM5 330 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 C6orf163Q5TEZ5 329 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 TMCO4Q5TGY1 634 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 SV2AQ7L0J3 742 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 NLRX1Q86UT6 975 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 MYLK4Q86YV6 388 aaPredicted RBP9.96□□□□□ -0.81
HDAC3-205ENST00000469550 CCNJLQ8IV13 435 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 KBTBD2Q8IY47 623 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 B4GALNT2Q8NHY0 566 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 PYROXD1Q8WU10 500 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 CPA5Q8WXQ8 436 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 PPP2R3CQ969Q6 453 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 SPATA33Q96N06 139 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 SLITRK1Q96PX8 696 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 PAFAH2Q99487 392 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 FAM118BQ9BPY3 351 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 CENPKQ9BS16 269 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 C16orf70Q9BSU1 422 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 SPATA16Q9BXB7 569 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 FRMD8P1Q9BZ68 369 aaPredicted RBP9.96□□□□□ -0.81
HDAC3-205ENST00000469550 CERS4Q9HA82 394 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 C17orf75Q9HAS0 396 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 METTL5Q9NRN9 209 aaKnown RBP9.96□□□□□ -0.81
HDAC3-205ENST00000469550 ZDHHC7Q9NXF8 308 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 KCNK4Q9NYG8 393 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 CNTN3Q9P232 1028 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 COMMD3-BMI1R4GMX3 469 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 RALGAPA2Q2PPJ7 1873 aa9.96□□□□□ -0.81
HDAC3-205ENST00000469550 DENND3A2RUS2 1198 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 LCHNA4D1U4 455 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 GOLGA8IPA6NC78 632 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 GOLGA8JA6NMD2 632 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 CAPN14A8MX76 684 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 FCHO1O14526 889 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 FKBP6O75344 327 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 TM7SF2O76062 418 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 ZSCAN5DPP0CG00 497 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 MYCLP12524 364 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-205ENST00000469550 CD58P19256 250 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 COL9A1P20849 921 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 ACTR3P61158 418 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 AP2B1P63010 937 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 SP2Q02086 613 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 TFF2Q03403 129 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 OVGP1Q12889 678 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 CBLBQ13191 982 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 IKBKEQ14164 716 aa9.95□□□□□ -0.82
HDAC3-205ENST00000469550 HIC1Q14526 733 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms