RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 MIOSQ9NXC5 875 aa7.92□□□□□ -1.14
COL6A3-208ENST00000468792 BCCIPQ9P287 314 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL6A3-208ENST00000468792 KANSL3Q9P2N6 904 aa7.92□□□□□ -1.14
COL6A3-208ENST00000468792 FZD10Q9ULW2 581 aa7.92□□□□□ -1.14
COL6A3-208ENST00000468792 USP3Q9Y6I4 520 aa7.92□□□□□ -1.14
COL6A3-208ENST00000468792 THSD7BQ9C0I4 1608 aa7.92□□□□□ -1.14
COL6A3-208ENST00000468792 C19orf67A6NJJ6 358 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 MEIS3P2A8K0S8 358 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 DCDC2CA8MYV0 355 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 HHLA1C9JL84 531 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 EBAG9O00559 213 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 NCAM2O15394 837 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 MGEA5O60502 916 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 GRAP2O75791 330 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ACSL3O95573 720 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 IFNB1P01574 187 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ZSCAN5DPP0CG00 497 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 LCP1P13796 627 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ATP2A2P16615 1042 aaKnown RBP7.91□□□□□ -1.14
COL6A3-208ENST00000468792 TPSB2P20231 275 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 CYP2F1P24903 491 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 CD52P31358 61 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 HPDP32754 393 aaPredicted RBP7.91□□□□□ -1.14
COL6A3-208ENST00000468792 HTR7P34969 479 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 VPS41P49754 854 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ATP1A2P50993 1020 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 SCNN1GP51170 649 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 GDF10P55107 478 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 DAOAP59103 153 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 GUCY1A3Q02108 690 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ADIGQ0VDE8 80 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 TRIM32Q13049 653 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 KCNJ11Q14654 390 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 TPSAB1Q15661 275 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 CDO1Q16878 200 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 DEFB115Q30KQ5 88 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 TIGD5Q53EQ6 642 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 SLC45A4Q5BKX6 768 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 EFHC2Q5JST6 749 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 KIAA0319Q5VV43 1072 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 CYP4F22Q6NT55 531 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 SCYL2Q6P3W7 929 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 DARS2Q6PI48 645 aaKnown RBP7.91□□□□□ -1.14
COL6A3-208ENST00000468792 TRAF7Q6Q0C0 670 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 CD300LGQ6UXG3 332 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 SLC24A5Q71RS6 500 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 YTHDF3Q7Z739 585 aaKnown RBP7.91□□□□□ -1.14
COL6A3-208ENST00000468792 FAM35AQ86V20 835 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 NLRP14Q86W24 1093 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ECHDC2Q86YB7 292 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 DEFB106AQ8N104 65 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 SIX6OS1Q8N1H7 587 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ATP11CQ8NB49 1132 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 SLAIN1Q8ND83 568 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 EPS8L3Q8TE67 593 aaKnown RBP7.91□□□□□ -1.14
COL6A3-208ENST00000468792 PPP1R13LQ8WUF5 828 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 MAML1Q92585 1016 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 PCED1BQ96HM7 432 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 OLFM3Q96PB7 478 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 CSPG4P5Q96PW8 444 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 CCT8L2Q96SF2 557 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 SMOQ99835 787 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ADAM2Q99965 735 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 FAM118BQ9BPY3 351 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 DHRS4Q9BTZ2 278 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 ELAC1Q9H777 363 aaKnown RBP7.91□□□□□ -1.14
COL6A3-208ENST00000468792 GPBP1L1Q9HC44 474 aaPredicted RBP7.91□□□□□ -1.14
COL6A3-208ENST00000468792 LRRC4CQ9HCJ2 640 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 SAYSD1Q9NPB0 183 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 AP4E1Q9UPM8 1137 aa7.91□□□□□ -1.14
COL6A3-208ENST00000468792 TSC2P49815 1807 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 TLDC2A0PJX2 215 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 MYBPHLA2RUH7 354 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ERICH4A6NGS2 130 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 H3BRJ5 948 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 NDUFAB1O14561 156 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 TRDMT1O14717 391 aaKnown RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 PRPF4O43172 522 aaKnown RBP eCLIP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 HCRTO43612 131 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ATP2C2O75185 946 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 AP1G2O75843 785 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 DGKIO75912 1065 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 OAZ2O95190 189 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ZBED1O96006 694 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 FYNP06241 537 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 CTSHP09668 335 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 GHRP10912 638 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 CKBP12277 381 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 MLNP12872 115 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ETS1P14921 441 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 CYP2C18P33260 490 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ADRA1BP35368 520 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 TIE1P35590 1138 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ARL4AP40617 200 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 MAGEA3P43357 314 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 GLUD2P49448 558 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 TKTL1P51854 596 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 DYNLT1P63172 113 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 IFI35P80217 286 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 RNASELQ05823 741 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms