RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ACE2Q9BYF1 805 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-203ENST00000467533 NACA2Q9H009 215 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 WDR35Q9P2L0 1181 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 AGO2Q9UKV8 859 aaKnown RBP10.87□□□□□ -0.67
HDAC3-203ENST00000467533 CDH9Q9ULB4 789 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 GABRDO14764 452 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 TRAK2O60296 914 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 IL18RAPO95256 599 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 KRT19P08727 400 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 PLCG1P19174 1290 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 ACSL1P33121 698 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 COPAP53621 1224 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 CDH8P55286 799 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 GUCY1B3Q02153 619 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 ILKQ13418 452 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 PRAMEF14Q5SWL7 426 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 HECTD3Q5T447 861 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 SKAP1Q86WV1 359 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 NT5DC4Q86YG4 428 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 LRRC52Q8N7C0 313 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 DCBLD1Q8N8Z6 715 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 IGSF22Q8N9C0 903 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 C1orf127Q8N9H9 656 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 TSC1Q92574 1164 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 BIRC7Q96CA5 298 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 PCED1BQ96HM7 432 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 HIC2Q96JB3 615 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 DUSP9Q99956 384 aaKnown RBP10.86□□□□□ -0.67
HDAC3-203ENST00000467533 CCSER2Q9H7U1 834 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 CRTAC1Q9NQ79 661 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.86□□□□□ -0.672e-13■■■■■ 130.4
HDAC3-203ENST00000467533 GDAP2Q9NXN4 497 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 PCDHB1Q9Y5F3 818 aa10.86□□□□□ -0.67
HDAC3-203ENST00000467533 TEP1Q99973 2627 aaKnown RBP10.86□□□□□ -0.67
HDAC3-203ENST00000467533 TISP43B9A030 160 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 ANKRD63C9JTQ0 380 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 NPC1O15118 1278 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 REC8O95072 547 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 SEMA4FO95754 770 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 MPOP05164 745 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 MYF5P13349 255 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 SCP2P22307 547 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 CD27P26842 260 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 YWHAQP27348 245 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 BCAT1P54687 386 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 GABREP78334 506 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 NFKB2Q00653 900 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 INSM1Q01101 510 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-203ENST00000467533 SOWAHAQ2M3V2 549 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 MDH1BQ5I0G3 518 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 HS2ST1Q7LGA3 356 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 CACTIN-AS1Q8N1I8 211 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 SYT2Q8N9I0 419 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-203ENST00000467533 UCMAQ8WVF2 138 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 SNRNP27Q8WVK2 155 aaKnown RBP10.85□□□□□ -0.67
HDAC3-203ENST00000467533 KCNN1Q92952 543 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 C8orf48Q96LL4 319 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 DPH1Q9BZG8 443 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 TM6SF1Q9BZW5 370 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 LHX5Q9H2C1 402 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 PLK2Q9NYY3 685 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 KCND2Q9NZV8 630 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 MARK1Q9P0L2 795 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 THAP10Q9P2Z0 257 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-203ENST00000467533 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 LSM7Q9UK45 103 aaKnown RBP10.85□□□□□ -0.67
HDAC3-203ENST00000467533 PAXBP1Q9Y5B6 917 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 NUMA1Q14980 2115 aa10.85□□□□□ -0.67
HDAC3-203ENST00000467533 KNL1Q8NG31 2342 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 VILLO15195 856 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 YKT6O15498 198 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 FAM13AO94988 1023 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 RTN3O95197 1032 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-203ENST00000467533 EPHX1P07099 455 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 PDGFRBP09619 1106 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 CISD3P0C7P0 127 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 PRKCHP24723 683 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 LMO2P25791 158 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 EPHA8P29322 1005 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-203ENST00000467533 SLFN12LQ6IEE8 588 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 LSMEM2Q8N112 164 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 MYCT1Q8N699 235 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 CSGALNACT2Q8N6G5 542 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 NECAB1Q8N987 351 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 SAP25Q8TEE9 199 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 KBTBD7Q8WVZ9 684 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 RFFLQ8WZ73 363 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 OVCA2Q8WZ82 227 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 SLC6A18Q96N87 628 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 PLIN2Q99541 437 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 BTBD1Q9H0C5 482 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 ITGA11Q9UKX5 1188 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 ODF2LQ9ULJ1 636 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 R3HCC1Q9Y3T6 440 aaKnown RBP10.84□□□□□ -0.67
HDAC3-203ENST00000467533 FLNCQ14315 2725 aa10.84□□□□□ -0.67
HDAC3-203ENST00000467533 K7ENP7 123 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 TSPAN3O60637 253 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 JAK2O60674 1132 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 MT-CO3P00414 261 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms