RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 NCAPHQ15003 741 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 SNRNP35Q16560 246 aaKnown RBP16.64■□□□□ 0.25
TSSC4-208ENST00000467308 KNOP1Q1ED39 458 aaKnown RBP16.64■□□□□ 0.25
TSSC4-208ENST00000467308 ZCWPW2Q504Y3 356 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 HECTD3Q5T447 861 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 ZNF513Q8N8E2 541 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-208ENST00000467308 B3GALNT2Q8NCR0 500 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 GLIS3Q8NEA6 775 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 NELFBQ8WX92 580 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 CAPN10Q9HC96 672 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 ZDHHC4Q9NPG8 344 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 DEC1Q9P2X7 70 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 STARD13Q9Y3M8 1113 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 ANKRD11Q6UB99 2663 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-208ENST00000467308 ATXN2Q99700 1313 aaKnown RBP16.64■□□□□ 0.25
TSSC4-208ENST00000467308 SPAARA0A1B0GVQ0 90 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 OPHN1O60890 802 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 TULP3O75386 442 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 DLATP10515 647 aaKnown RBP16.63■□□□□ 0.25
TSSC4-208ENST00000467308 GABRG2P18507 467 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 TNNI1P19237 187 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 HOXD13P35453 343 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 SNRPFP62306 86 aaKnown RBP16.63■□□□□ 0.25
TSSC4-208ENST00000467308 HNRNPDQ14103 355 aaKnown RBP16.63■□□□□ 0.25
TSSC4-208ENST00000467308 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 TTI2Q6NXR4 508 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 TERB1Q8NA31 727 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 FBXO32Q969P5 355 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 CGRRF1Q99675 332 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 B3GNT5Q9BYG0 378 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 DPEP3Q9H4B8 488 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 SPHK2Q9NRA0 654 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 CGNQ9P2M7 1197 aaKnown RBP16.63■□□□□ 0.25
TSSC4-208ENST00000467308 KLK13Q9UKR3 277 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 TRAF3IP3Q9Y228 551 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 SH3BP1Q9Y3L3 701 aa16.63■□□□□ 0.25
TSSC4-208ENST00000467308 BECN2A8MW95 431 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 A8MXQ7 604 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 CLDN5O00501 218 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 PDXKO00764 312 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 ZNF217O75362 1048 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 HOXB3P14651 431 aaPredicted RBP16.62■□□□□ 0.25
TSSC4-208ENST00000467308 NTSR1P30989 418 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 ZNF33AQ06730 810 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 IFRD2Q12894 506 aaPredicted RBP16.62■□□□□ 0.25
TSSC4-208ENST00000467308 PSMD6Q15008 389 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 NFIL3Q16649 462 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 EDRF1Q3B7T1 1238 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 KLHL10Q6JEL2 608 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 LUZP1Q86V48 1076 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 BBS7Q8IWZ6 715 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 AOPEPQ8N6M6 819 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 NAT16Q8N8M0 369 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 GOLGA5Q8TBA6 731 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 GTPBP2Q9BX10 602 aaKnown RBP16.62■□□□□ 0.25
TSSC4-208ENST00000467308 COMMD8Q9NX08 183 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 IL37Q9NZH6 218 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 CALCOCO1Q9P1Z2 691 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 CTNND2Q9UQB3 1225 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 ATP8B3O60423 1300 aa16.62■□□□□ 0.25
TSSC4-208ENST00000467308 A0A1W2PQF6 199 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 FAM92AA1XBS5 289 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 ARHGAP33O14559 1287 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 ZBTB24O43167 697 aaPredicted RBP16.61■□□□□ 0.25
TSSC4-208ENST00000467308 ZDHHC11BP0C7U3 371 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 HOXB2P14652 356 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 ATICP31939 592 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 TPM4P67936 248 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 RING1Q06587 406 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 CYP24A1Q07973 514 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 ZNF423Q2M1K9 1284 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 C10orf76Q5T2E6 689 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 TMEM25Q86YD3 366 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 ZC3H3Q8IXZ2 948 aaKnown RBP16.61■□□□□ 0.25
TSSC4-208ENST00000467308 MINDY1Q8N5J2 469 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 RNF214Q8ND24 703 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 KCNK16Q96T55 309 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 XYLT2Q9H1B5 865 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 GRPEL1Q9HAV7 217 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 AGPAT3Q9NRZ7 376 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 DNAAF2Q9NVR5 837 aaKnown RBP16.61■□□□□ 0.25
TSSC4-208ENST00000467308 CHORDC1Q9UHD1 332 aaPredicted RBP16.61■□□□□ 0.25
TSSC4-208ENST00000467308 HCN2Q9UL51 889 aa16.61■□□□□ 0.25
TSSC4-208ENST00000467308 LAMA5O15230 3695 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 IGHV1OR15-9A0A0B4J2B8 117 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 TGFB1I1O43294 461 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 SYPP08247 313 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 ZNF18P17022 549 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 SLC5A3P53794 718 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 PMS1P54277 932 aaKnown RBP16.6■□□□□ 0.25
TSSC4-208ENST00000467308 SLC14A1Q13336 389 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 TRPC3Q13507 836 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 ACAP1Q15027 740 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 ANO4Q32M45 955 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 C12orf56Q8IXR9 622 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 RDH13Q8NBN7 331 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms