RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ZNF865P0CJ78 1059 aaPredicted RBP15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 RGS2P41220 211 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 SERPINB4P48594 390 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 INHBEP58166 350 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 CDC42EP1Q00587 391 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 SLC10A6Q3KNW5 377 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 DARS2Q6PI48 645 aaKnown RBP15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 C17orf99Q6UX52 265 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 PRPF39Q86UA1 669 aaKnown RBP15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 SOCS4Q8WXH5 440 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 USP6NLQ92738 828 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 TTC17Q96AE7 1141 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 ACAP3Q96P50 834 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 ADPGKQ9BRR6 497 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 USP29Q9HBJ7 922 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 ASNSD1Q9NWL6 643 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 FLRT1Q9NZU1 646 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 ZFATQ9P243 1243 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 NRCAMQ92823 1304 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 RALGAPA2Q2PPJ7 1873 aa15.3■□□□□ 0.04
PRPF38B-204ENST00000467302 CCDC189A1A4V9 331 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 AVILO75366 819 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 MICAL2O94851 1124 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 ITGB3P05106 788 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 SLC10A3P09131 477 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 ZNF143P52747 638 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 YWHAGP61981 247 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 PTPN11Q06124 597 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 ORC1Q13415 861 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 RINLQ6ZS11 566 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 CDHR3Q6ZTQ4 885 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 APBB1IPQ7Z5R6 666 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 SAPCD2Q86UD0 394 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 ZC3H18Q86VM9 953 aaKnown RBP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 SLC26A11Q86WA9 606 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 IFNL1Q8IU54 200 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 RTP4Q96DX8 246 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 APBA2Q99767 749 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 OSBPL1AQ9BXW6 950 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 MMADHCQ9H3L0 296 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 PLAC1Q9HBJ0 212 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 TAS2R1Q9NYW7 299 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 STOML1Q9UBI4 398 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 HMGXB4Q9UGU5 601 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 TTLL3Q9Y4R7 772 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 GYG2O15488 501 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 SMIM10L2AP0DMW4 78 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 SMIM10L2BP0DMW5 78 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 RARBP10826 455 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 ATICP31939 592 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 GPD2P43304 727 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 KIZQ2M2Z5 673 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 DCAF4L1Q3SXM0 396 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 ACSBG2Q5FVE4 666 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 SH3PXD2AQ5TCZ1 1133 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 TTC39BQ5VTQ0 682 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 TTC7BQ86TV6 843 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 DNAJC9Q8WXX5 260 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 OXNAD1Q96HP4 312 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 SRPK1Q96SB4 655 aaKnown RBP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 ELOVL4Q9GZR5 314 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 SMYD3Q9H7B4 428 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 ZNF180Q9UJW8 692 aa15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRPF38B-204ENST00000467302 C2orf71A6NGG8 1288 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 E5RJQ4 531 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 CILPO75339 1184 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 LINGO3P0C6S8 592 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 MYL2P10916 166 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 CPT1AP50416 773 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 CDH6P55285 790 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 YWHAZP63104 245 aaKnown RBP15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 ZBTB16Q05516 673 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 GRIK3Q13003 919 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 KPNB1Q14974 876 aaKnown RBP15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 TMEM132DQ14C87 1099 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 HSF5Q4G112 596 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 FAM47CQ5HY64 1035 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 TRNP1Q6NT89 227 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 CXorf38Q8TB03 319 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 FAF2Q96CS3 445 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 ZNF333Q96JL9 665 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 CNPY3Q9BT09 278 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 GCOM2Q9BZD3 368 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 FAM49AQ9H0Q0 323 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 ADAMTS10Q9H324 1103 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 ARHGEF4Q9NR80 690 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 NMRK1Q9NWW6 199 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 PAK5Q9P286 719 aa15.28■□□□□ 0.04
PRPF38B-204ENST00000467302 FAM237BA0A1B0GVD1 139 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 SMIM35A0A1B0GVV1 85 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 MBLAC1A4D2B0 266 aaPredicted RBP15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 TRIM49D1C9J1S8 452 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 FCHO1O14526 889 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 COPEO14579 308 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 HMGCRP04035 888 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 PRKCHP24723 683 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms