RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PCNX4Q63HM2 1172 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ACAD10Q6JQN1 1059 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 IARS2Q9NSE4 1012 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 TRPC4Q9UBN4 977 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ADAM21Q9UKJ8 722 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.97□□□□□ -0.97
HPS4-209ENST00000466781 TDRKHQ9Y2W6 561 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 USP15Q9Y4E8 981 aaPredicted RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 SNX8Q9Y5X2 465 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 NR2E3Q9Y5X4 410 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ANKRD26Q9UPS8 1709 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 A0A087WZ62 844 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 XYLBO75191 536 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 NDUFS2O75306 463 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 CLTBP09497 229 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 RBP3P10745 1247 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 RAG1P15918 1043 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 PLIN5Q00G26 463 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ELAVL2Q12926 359 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 FNDC3BQ53EP0 1204 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 DENND1BQ6P3S1 775 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 LRRC8DQ7L1W4 858 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 PTF1AQ7RTS3 328 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 HDDC2Q7Z4H3 204 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ACOT1Q86TX2 421 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 MICU2Q8IYU8 434 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ACSF2Q96CM8 615 aaPredicted RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 AHSPQ9NZD4 102 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 SESN1Q9Y6P5 492 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 CBX4O00257 560 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 SPTLC1O15269 473 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 ERN1O75460 977 aaKnown RBP8.96□□□□□ -0.97
HPS4-209ENST00000466781 MTA2O94776 668 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 MDH1P40925 334 aaKnown RBP8.96□□□□□ -0.97
HPS4-209ENST00000466781 NAMPTP43490 491 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 ALDH9A1P49189 494 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 PDK2Q15119 407 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 SEZ6Q53EL9 994 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 MKNK1Q9BUB5 465 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 TRIT1Q9H3H1 467 aaKnown RBP8.96□□□□□ -0.97
HPS4-209ENST00000466781 EXO5Q9H790 373 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 RGS18Q9NS28 235 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 RAB23Q9ULC3 237 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 POLR1DQ9Y2S0 133 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 ADAMTSL3P82987 1691 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 HNRNPCP07910 306 aaKnown RBP eCLIP8.96□□□□□ -0.97
HPS4-209ENST00000466781 PPP2R1BP30154 601 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 CCNG1P51959 295 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 ORC1Q13415 861 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 PPM1LQ5SGD2 360 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 AGBL2Q5U5Z8 902 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 KAT2BQ92831 832 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 C1QTNF7Q9BXJ2 289 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 SHCBP1LQ9BZQ2 653 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 ROPN1BQ9BZX4 212 aaPredicted RBP8.96□□□□□ -0.97
HPS4-209ENST00000466781 ILKAPQ9H0C8 392 aaPredicted RBP8.96□□□□□ -0.97
HPS4-209ENST00000466781 ROPN1Q9HAT0 212 aaPredicted RBP8.96□□□□□ -0.97
HPS4-209ENST00000466781 TBC1D13Q9NVG8 400 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 KLHL28Q9NXS3 571 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 NALCNQ8IZF0 1738 aa8.96□□□□□ -0.97
HPS4-209ENST00000466781 SKAP2O75563 359 aaPredicted RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 GLP2RO95838 553 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 NUDT14O95848 222 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 HOXC6P09630 235 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 ZNF286BP0CG31 522 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 CYP2A6P11509 494 aaPredicted RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 HSPA13P48723 471 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 NUDT2P50583 147 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 OAZ1P54368 228 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 MTA1Q13330 715 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 ACOX1Q15067 660 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 FKBP1CQ5VVH2 108 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 SNX30Q5VWJ9 437 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 JAMLQ86YT9 394 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 NLGN2Q8NFZ4 835 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 RNASE11Q8TAA1 199 aaKnown RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 TRPM4Q8TD43 1214 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 P2RX7Q99572 595 aaKnown RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 EPN3Q9H201 632 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 CAAP1Q9H8G2 361 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 SPG21Q9NZD8 308 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 VPS51Q9UID3 782 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 KIAA1257Q9ULG3 409 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 CNTNAP2Q9UHC6 1331 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 GLTPD2A6NH11 291 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 CASTOR2A6NHX0 329 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 ZNF839A8K0R7 811 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 OGTO15294 1046 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 SLC37A4O43826 429 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 RAB27AP51159 221 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 STX5Q13190 355 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 ATAD3BQ5T9A4 648 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 DSG4Q86SJ6 1040 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 ADSSL1Q8N142 457 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 USP6NLQ92738 828 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
HPS4-209ENST00000466781 ZCCHC2Q9C0B9 1178 aaKnown RBP8.96□□□□□ -0.98
HPS4-209ENST00000466781 MTMR12Q9C0I1 747 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 VTA1Q9NP79 307 aa8.96□□□□□ -0.98
HPS4-209ENST00000466781 ARHGEF3Q9NR81 526 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms