RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CETN1Q12798 172 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 CCDC40Q4G0X9 1142 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 PMS2CLQ68D20 193 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 TCEAL6Q6IPX3 200 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 KLHDC10Q6PID8 442 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 ARMCX6Q7L4S7 300 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 CCDC186Q7Z3E2 898 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 RASSF3Q86WH2 238 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 RLN3Q8WXF3 142 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 SEMA4DQ92854 862 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 TCEAL3Q969E4 200 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 IPO9Q96P70 1041 aaKnown RBP18.42■□□□□ 0.54
COL7A1-206ENST00000466591 DCLK3Q9C098 648 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 NMUR1Q9HB89 426 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 LRRC4Q9HBW1 653 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 DMXL1Q9Y485 3027 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 BCLAF3A2AJT9 711 aaKnown RBP18.41■□□□□ 0.54
COL7A1-206ENST00000466591 HHLA1C9JL84 531 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 NTSR1P30989 418 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 DGKGP49619 791 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 PGFP49763 221 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 LRMPQ12912 555 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 GOLGA7BQ2TAP0 167 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 SGO2Q562F6 1265 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 DAB2IPQ5VWQ8 1189 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 ETFBKMTQ8IXQ9 262 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 FMR1NBQ8N0W7 255 aaPredicted RBP18.41■□□□□ 0.54
COL7A1-206ENST00000466591 WBP2Q969T9 261 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 ARID3AQ99856 593 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 DUSP9Q99956 384 aaKnown RBP18.41■□□□□ 0.54
COL7A1-206ENST00000466591 OSER1Q9NX31 292 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 CLIC5Q9NZA1 410 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 KIAA1549LQ6ZVL6 1849 aa18.41■□□□□ 0.54
COL7A1-206ENST00000466591 DCHS1Q96JQ0 3298 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 ANTXRLA6NF34 631 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 BCKDHBP21953 392 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 TBXAS1P24557 533 aaPredicted RBP18.4■□□□□ 0.54
COL7A1-206ENST00000466591 CHKAP35790 457 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 PPP1R2P41236 205 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 KIR2DL1P43626 348 aaPredicted RBP18.4■□□□□ 0.54
COL7A1-206ENST00000466591 RAD23BP54727 409 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 ARID5AQ03989 594 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 MESP2Q0VG99 397 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 CUL2Q13617 745 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 PLA2G2CQ5R387 149 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 ANKRD40Q6AI12 368 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 ISM2Q6H9L7 571 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 KLHL10Q6JEL2 608 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 PIGZQ86VD9 579 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 SIX6OS1Q8N1H7 587 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 SLC4A11Q8NBS3 891 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 RNF139Q8WU17 664 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 ERCC4Q92889 916 aaPredicted RBP18.4■□□□□ 0.54
COL7A1-206ENST00000466591 TATDN2Q93075 761 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 ERLEC1Q96DZ1 483 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 FAM124BQ9H5Z6 455 aaPredicted RBP18.4■□□□□ 0.54
COL7A1-206ENST00000466591 METTL14Q9HCE5 456 aaKnown RBP18.4■□□□□ 0.54
COL7A1-206ENST00000466591 PLK2Q9NYY3 685 aa18.4■□□□□ 0.54
COL7A1-206ENST00000466591 SPAG17Q6Q759 2223 aa18.39■□□□□ 0.54
COL7A1-206ENST00000466591 A0A0A0MRY4 1105 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 CACNG3O60359 315 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 ADRB1P08588 477 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 TKTL1P51854 596 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 BCAT1P54687 386 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 YWHAGP61981 247 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL7A1-206ENST00000466591 RPL6Q02878 288 aaKnown RBP18.39■□□□□ 0.53
COL7A1-206ENST00000466591 STARD3Q14849 445 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 CBWD6Q4V339 395 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 CBWD3Q5JTY5 395 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 CBWD5Q5RIA9 395 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 TMEFF1Q8IYR6 380 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 ANKRD52Q8NB46 1076 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 NUSAP1Q9BXS6 441 aaKnown RBP18.39■□□□□ 0.53
COL7A1-206ENST00000466591 RXFP3Q9NSD7 469 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 MARCH2Q9P0N8 246 aa18.39■□□□□ 0.53
COL7A1-206ENST00000466591 SLC12A8A0AV02 714 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 TRIM49BA6NDI0 452 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 TRIM24O15164 1050 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 AP5Z1O43299 807 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 ADAM23O75077 832 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 STC2O76061 302 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 CORO1AP31146 461 aaKnown RBP18.38■□□□□ 0.53
COL7A1-206ENST00000466591 P2RY2P41231 377 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 DPP6P42658 865 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 ATXN3P54252 364 aaPredicted RBP18.38■□□□□ 0.53
COL7A1-206ENST00000466591 E2F5Q15329 346 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 LYSMD4Q5XG99 296 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 EGFLAMQ63HQ2 1017 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 ARHGAP17Q68EM7 881 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 SLC36A4Q6YBV0 504 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 DENND1CQ8IV53 801 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 UCMAQ8WVF2 138 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 GOLGA1Q92805 767 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 TIGD1Q96MW7 591 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 NT5C1BQ96P26 610 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 TMEM9BQ9NQ34 198 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 OLA1Q9NTK5 396 aaKnown RBP18.38■□□□□ 0.53
COL7A1-206ENST00000466591 MARK1Q9P0L2 795 aa18.38■□□□□ 0.53
COL7A1-206ENST00000466591 TSPAN16Q9UKR8 245 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms