RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 INTS6LQ5JSJ4 861 aaKnown RBP19■□□□□ 0.63
COL9A3-205ENST00000466192 RAB41Q5JT25 222 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 RNASEH2BQ5TBB1 312 aaKnown RBP19■□□□□ 0.63
COL9A3-205ENST00000466192 C1orf228Q6PIY5 440 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 B4GALNT4Q76KP1 1039 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 LRRC8DQ7L1W4 858 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 VSIG1Q86XK7 387 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 OR10T2Q8NGX3 314 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 NT5C3BQ969T7 300 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 FAF2Q96CS3 445 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 SMARCD1Q96GM5 515 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 SUSD3Q96L08 255 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 ZNF670Q9BS34 389 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 EPN3Q9H201 632 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 DHX35Q9H5Z1 703 aaKnown RBP19■□□□□ 0.63
COL9A3-205ENST00000466192 TMLHEQ9NVH6 421 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 MTMR10Q9NXD2 777 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 AP4E1Q9UPM8 1137 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 HHLA1C9JL84 531 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 NDUFAB1O14561 156 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 NOS2P35228 1153 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 MAGEA4P43358 317 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 CCT5P48643 541 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 MORF4L2Q15014 288 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 HP1BP3Q5SSJ5 553 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-205ENST00000466192 SYPL2Q5VXT5 272 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 SLC9A4Q6AI14 798 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 ZC3H18Q86VM9 953 aaKnown RBP18.99■□□□□ 0.63
COL9A3-205ENST00000466192 TAB3Q8N5C8 712 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-205ENST00000466192 SLC2A13Q96QE2 648 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 TMEM209Q96SK2 561 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 NPY6RQ99463 290 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 PKMYT1Q99640 499 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 UNC93B1Q9H1C4 597 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 SAYSD1Q9NPB0 183 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 DSEQ9UL01 958 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 PATJQ8NI35 1801 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 FYNP06241 537 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 SELPP16109 830 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 DAOAP59103 153 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 CCDC38Q502W7 563 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 OVOS1Q6IE37 1185 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 MFSD5Q6N075 450 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 BNIPLQ7Z465 357 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 CTU1Q7Z7A3 348 aaKnown RBP18.99■□□□□ 0.63
COL9A3-205ENST00000466192 LRRTM3Q86VH5 581 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 FAM131BQ86XD5 332 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 RELL1Q8IUW5 271 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 FAM71DQ8N9W8 422 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 SELENOSQ9BQE4 189 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 FOXP3Q9BZS1 431 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 CSNK1G1Q9HCP0 422 aa18.99■□□□□ 0.63
COL9A3-205ENST00000466192 YJEFN3A6XGL0 299 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 ZNF487B1APH4 448 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 E7ENQ6 273 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 GOLGA8MH3BSY2 632 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 APOL1O14791 398 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 FBXO21O94952 628 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 PAX3P23760 479 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 RPL22P35268 128 aaKnown RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 CTCFP49711 727 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 NRLP54845 237 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 DSC1Q08554 894 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 GPNMBQ14956 572 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 NOMO2Q5JPE7 1267 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 KCTD15Q96SI1 283 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 STMN4Q9H169 189 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 POPDC2Q9HBU9 364 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 CTNNAL1Q9UBT7 734 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 NAALADL1Q9UQQ1 740 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 SCN5AQ14524 2016 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 E7EVH7 732 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 NBNO60934 754 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 MYCP01106 439 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 USP17L7P0C7H9 530 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 TGM2P21980 687 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 BDNFP23560 247 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 CYP2F1P24903 491 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 BCAR1P56945 870 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 ROR1Q01973 937 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 FASTKD3Q14CZ7 662 aaKnown RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 TNFAIP8L3Q5GJ75 292 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 DARS2Q6PI48 645 aaKnown RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 FAM126BQ8IXS8 530 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 SERPINB12Q96P63 405 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 NRDE2Q9H7Z3 1164 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 CNOT10Q9H9A5 744 aaKnown RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 CNGB3Q9NQW8 809 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 FARP1Q9Y4F1 1045 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-205ENST00000466192 HEY1Q9Y5J3 304 aa18.98■□□□□ 0.63
COL9A3-205ENST00000466192 VWA8A3KMH1 1905 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 M0QYT0 321 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 MMP13P45452 471 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 CEP128Q6ZU80 1094 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 PYROXD2Q8N2H3 581 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 PRCCQ92733 491 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-205ENST00000466192 FTHL17Q9BXU8 183 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 FAM107BQ9H098 131 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 TBC1D13Q9NVG8 400 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 SAGE1Q9NXZ1 904 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms