RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 ADAMTS20P59510 1910 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 A0A1W2PQD8 194 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 TAF4O00268 1085 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 ARHGAP33O14559 1287 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 POLR2DO15514 142 aaKnown RBP11.55□□□□□ -0.56
COL11A1-207ENST00000465209 CYP26A1O43174 497 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 EXOC3O60645 756 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 ASS1P00966 412 aaKnown RBP11.55□□□□□ -0.56
COL11A1-207ENST00000465209 NDST1P52848 882 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 AP3M2P53677 418 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 MAP3K7CLP57077 242 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 SIM1P81133 766 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-207ENST00000465209 INCA1Q0VD86 236 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 BIRC3Q13489 604 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 PREPLQ4J6C6 727 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-207ENST00000465209 SPOPLQ6IQ16 392 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 KLHDC10Q6PID8 442 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 RAB44Q7Z6P3 723 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-207ENST00000465209 UNC93AQ86WB7 457 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 ZNF419Q96HQ0 510 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-207ENST00000465209 MRGPRX1Q96LB2 322 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 HSPA12BQ96MM6 686 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 MED10Q9BTT4 135 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 BACH2Q9BYV9 841 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 FBXO44Q9H4M3 255 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 TLR8Q9NR97 1041 aaKnown RBP11.55□□□□□ -0.56
COL11A1-207ENST00000465209 CYP8B1Q9UNU6 501 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 SCML2Q9UQR0 700 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 RAD54BQ9Y620 910 aa11.55□□□□□ -0.56
COL11A1-207ENST00000465209 NUMA1Q14980 2115 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 GFRA2O00451 464 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 MDM4O15151 490 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 OPHN1O60890 802 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 PHACTR2O75167 634 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 ZNF217O75362 1048 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 GFPT1Q06210 699 aaPredicted RBP11.54□□□□□ -0.56
COL11A1-207ENST00000465209 STK4Q13043 487 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 ENPP2Q13822 863 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 RESP18Q5W5W9 173 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 TPGS1Q6ZTW0 290 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 RABEPKQ7Z6M1 372 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 GRAMD1CQ8IYS0 662 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 CHPFQ8IZ52 775 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 TRIML1Q8N9V2 468 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 RBBP8NLQ8NC74 664 aaPredicted RBP11.54□□□□□ -0.56
COL11A1-207ENST00000465209 ERLEC1Q96DZ1 483 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 HNRNPABQ99729 332 aaKnown RBP11.54□□□□□ -0.56
COL11A1-207ENST00000465209 GTPBP2Q9BX10 602 aaKnown RBP11.54□□□□□ -0.56
COL11A1-207ENST00000465209 BBS2Q9BXC9 721 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 PNPLA8Q9NP80 782 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 FAM49BQ9NUQ9 324 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL11A1-207ENST00000465209 CACNA2D2Q9NY47 1150 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 USP36Q9P275 1121 aaKnown RBP11.54□□□□□ -0.56
COL11A1-207ENST00000465209 TMEM131Q92545 1883 aa11.54□□□□□ -0.56
COL11A1-207ENST00000465209 TP53BP1Q12888 1972 aaPredicted RBP11.54□□□□□ -0.56
COL11A1-207ENST00000465209 A0A1W2PQH9 124 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 WASH3PC4AMC7 463 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 H0Y626 953 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 K7ELQ4 463 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-207ENST00000465209 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
COL11A1-207ENST00000465209 TRIM16O95361 564 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 PENKP01210 267 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-207ENST00000465209 KLKB1P03952 638 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 FAM200BP0CF97 657 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 ATP5C1P36542 298 aaKnown RBP11.53□□□□□ -0.56
COL11A1-207ENST00000465209 KIF11P52732 1056 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 RING1Q06587 406 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 FYB2Q5VWT5 728 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 SV2AQ7L0J3 742 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 SCD5Q86SK9 330 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 METTL3Q86U44 580 aaKnown RBP11.53□□□□□ -0.56
COL11A1-207ENST00000465209 HDDC3Q8N4P3 179 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 CHCHD4Q8N4Q1 142 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 ZNF276Q8N554 614 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 GOLGA5Q8TBA6 731 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 TAF4BQ92750 862 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 CAMK1GQ96NX5 476 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 XPO6Q96QU8 1125 aaKnown RBP11.53□□□□□ -0.56
COL11A1-207ENST00000465209 MKRN2Q9H000 416 aaKnown RBP11.53□□□□□ -0.56
COL11A1-207ENST00000465209 APOBEC3GQ9HC16 384 aaKnown RBP11.53□□□□□ -0.56
COL11A1-207ENST00000465209 WDR35Q9P2L0 1181 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 NUDT5Q9UKK9 219 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 PCDHA7Q9UN72 937 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 SLC27A6Q9Y2P4 619 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 PCDHA5Q9Y5H7 936 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 USP3Q9Y6I4 520 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 APC2O95996 2303 aa11.53□□□□□ -0.56
COL11A1-207ENST00000465209 KCNJ18B7U540 433 aa11.52□□□□□ -0.57
COL11A1-207ENST00000465209 CBFA2T3O75081 653 aa11.52□□□□□ -0.57
COL11A1-207ENST00000465209 STC2O76061 302 aa11.52□□□□□ -0.57
COL11A1-207ENST00000465209 HLA-DRAP01903 254 aa11.52□□□□□ -0.57
COL11A1-207ENST00000465209 RPN1P04843 607 aaKnown RBP11.52□□□□□ -0.57
COL11A1-207ENST00000465209 C7P10643 843 aa11.52□□□□□ -0.57
COL11A1-207ENST00000465209 RARGP13631 454 aa11.52□□□□□ -0.57
COL11A1-207ENST00000465209 ACO1P21399 889 aaKnown RBP11.52□□□□□ -0.57
COL11A1-207ENST00000465209 ADORA2BP29275 332 aa11.52□□□□□ -0.57
COL11A1-207ENST00000465209 AFMP43652 599 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms