RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TMEM8AQ9HCN3 771 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 HELLSQ9NRZ9 838 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 KAT6AQ92794 2004 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 H3BNC9 293 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 USP1O94782 785 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 MORC3Q14149 939 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 KCNJ12Q14500 433 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 RAB30Q15771 203 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 CERKLQ49MI3 558 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-205ENST00000464541 PRAMEF17Q5VTA0 474 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 NTN5Q8WTR8 489 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-205ENST00000464541 OVCA2Q8WZ82 227 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 GRAMD1AQ96CP6 724 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 TTLL2Q9BWV7 592 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 SEMA4CQ9C0C4 833 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 SLC39A10Q9ULF5 831 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 LRCH1Q9Y2L9 728 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 DTNAQ9Y4J8 743 aa6.95□□□□□ -1.3
PTCD3-205ENST00000464541 ZSCAN9O15535 394 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-205ENST00000464541 APEHP13798 732 aaKnown RBP6.94□□□□□ -1.3
PTCD3-205ENST00000464541 PECAM1P16284 738 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-205ENST00000464541 ZNF37AP17032 561 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-205ENST00000464541 DNASE1L3Q13609 305 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 FAM187BQ17R55 369 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 AASDHQ4L235 1098 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-205ENST00000464541 TMTC4Q5T4D3 741 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 SERPINA13PQ6UXR4 307 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 ZNF575Q86XF7 245 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 CLASRPQ8N2M8 674 aaKnown RBP6.94□□□□□ -1.3
PTCD3-205ENST00000464541 EDC3Q96F86 508 aaKnown RBP6.94□□□□□ -1.3
PTCD3-205ENST00000464541 CCDC17Q96LX7 622 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 ASB2Q96Q27 587 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 ASIC5Q9NY37 505 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 FLRT1Q9NZU1 646 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 LPAR3Q9UBY5 353 aa6.94□□□□□ -1.3
PTCD3-205ENST00000464541 ABHD14A-ACY1A0A1B0GW23 586 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 TCRBV5S1A1TA0A578 114 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 GOLGA6L3A6NEY3 463 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 WIPF3A6NGB9 483 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 MANSC4A6NHS7 340 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-205ENST00000464541 TISP43B9A030 160 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 SMIM22K7EJ46 135 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 GCATO75600 419 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 SERPINB3P29508 390 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 COPB1P53618 953 aaKnown RBP6.93□□□□□ -1.3
PTCD3-205ENST00000464541 DEUP1Q05D60 604 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 GRM1Q13255 1194 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 STARD3Q14849 445 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 LARS2Q15031 903 aaKnown RBP6.93□□□□□ -1.3
PTCD3-205ENST00000464541 TTC30AQ86WT1 665 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 P3H2Q8IVL5 708 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 RITA1Q96K30 269 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 FZD4Q9ULV1 537 aa6.93□□□□□ -1.3
PTCD3-205ENST00000464541 ARHGEF17Q96PE2 2063 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-205ENST00000464541 PRRT4C9JH25 899 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 NTSR2O95665 410 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 LATS1O95835 1130 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 MMP8P22894 467 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 CERS1P27544 350 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 C21orf58P58505 322 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 GPC5P78333 572 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 CCDC15Q0P6D6 951 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 TRIM71Q2Q1W2 868 aaKnown RBP6.92□□□□□ -1.3
PTCD3-205ENST00000464541 ARHGAP15Q53QZ3 475 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 FAM90A2PQ658T7 463 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 GRHL2Q6ISB3 625 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 VSTM1Q6UX27 236 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 CHSY1Q86X52 802 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 RASGRP3Q8IV61 690 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 FAM71DQ8N9W8 422 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 MAFAQ8NHW3 353 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-205ENST00000464541 MUL1Q969V5 352 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 HS6ST2Q96MM7 605 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 WDR12Q9GZL7 423 aaKnown RBP6.92□□□□□ -1.3
PTCD3-205ENST00000464541 ASAP1Q9ULH1 1129 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 MAFFQ9ULX9 164 aa6.92□□□□□ -1.3
PTCD3-205ENST00000464541 MASP2O00187 686 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 TMIGD3P0DMS9 266 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-205ENST00000464541 PBX1P40424 430 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 RHBDL3P58872 404 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 TNFAIP2Q03169 654 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 PGBD2Q6P3X8 592 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 TMEM65Q6PI78 240 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 DCDC5Q6ZRR9 648 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 SPICE1Q8N0Z3 855 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 PNLDC1Q8NA58 520 aaKnown RBP6.91□□□□□ -1.3
PTCD3-205ENST00000464541 DPF1Q92782 380 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 HIC2Q96JB3 615 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 RNF26Q9BY78 433 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-205ENST00000464541 PLCB1Q9NQ66 1216 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 SPATA31A1Q5TZJ5 1347 aa6.91□□□□□ -1.3
PTCD3-205ENST00000464541 TMEM232C9JQI7 657 aa6.9□□□□□ -1.3
PTCD3-205ENST00000464541 FFAR2O15552 330 aa6.9□□□□□ -1.3
PTCD3-205ENST00000464541 DHHO43323 396 aa6.9□□□□□ -1.3
PTCD3-205ENST00000464541 NHLRC4P0CG21 123 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-205ENST00000464541 SRGAP2BP0DMP2 458 aa6.9□□□□□ -1.3
PTCD3-205ENST00000464541 MATN1P21941 496 aa6.9□□□□□ -1.3
PTCD3-205ENST00000464541 IL6STP40189 918 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-205ENST00000464541 FOXF2Q12947 444 aa6.9□□□□□ -1.3
PTCD3-205ENST00000464541 OS9Q13438 667 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms