RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MAP2K2P36507 400 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 MMP13P45452 471 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 CTCFP49711 727 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 ATXN1P54253 815 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 PPP6R3Q5H9R7 873 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 MFSD5Q6N075 450 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 TRAF7Q6Q0C0 670 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 CD300LGQ6UXG3 332 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 TAX1BP1Q86VP1 789 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 NDRG1Q92597 394 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 PRCCQ92733 491 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 SERPINB12Q96P63 405 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 SLC2A13Q96QE2 648 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 ACBD6Q9BR61 282 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 SAYSD1Q9NPB0 183 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 STAP1Q9ULZ2 295 aa22.6■■□□□ 1.21
PDLIM2-216ENST00000464275 CFAP69A5D8W1 941 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 SMIM23A6NLE4 172 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 H7C0C1 242 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 EOMESO95936 686 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 ZFXP17010 805 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 CYP2F1P24903 491 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 ATP5OP48047 213 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 NDUFV1P49821 464 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 AUHQ13825 339 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 ARHGEF6Q15052 776 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 DCLRE1AQ6PJP8 1040 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 PSTKQ8IV42 348 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 CNPY4Q8N129 248 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 FAM71DQ8N9W8 422 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 NT5C3BQ969T7 300 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 SMARCD1Q96GM5 515 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 TTC25Q96NG3 672 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 NPY6RQ99463 290 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 RTP3Q9BQQ7 232 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 PHACTR1Q9C0D0 580 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 NRDE2Q9H7Z3 1164 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 STARD7Q9NQZ5 370 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 DCDC2CA8MYV0 355 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 TCEA3O75764 348 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 ABHD2P08910 425 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 BRCC3P46736 316 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 DCAF6Q58WW2 860 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 TNFAIP8L3Q5GJ75 292 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 RAB41Q5JT25 222 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 GKAP1Q5VSY0 366 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 BNIPLQ7Z465 357 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 ZC3H18Q86VM9 953 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 SUGP1Q8IWZ8 645 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 CACNA2D3Q8IZS8 1091 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 CCDC185Q8N715 623 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 C9orf72Q96LT7 481 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 XPO6Q96QU8 1125 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 KCTD15Q96SI1 283 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 POPDC2Q9HBU9 364 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 CNGB3Q9NQW8 809 aa22.59■■□□□ 1.21
PDLIM2-216ENST00000464275 C9IYK1 514 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 I3L4J1 428 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 APLP1P51693 650 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 INTS6LQ5JSJ4 861 aaKnown RBP22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 FAM171BQ6P995 826 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 CENPUQ71F23 418 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 TAOK1Q7L7X3 1001 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 RTN4RL1Q86UN2 441 aaPredicted RBP22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 ZMIZ2Q8NF64 920 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 RSPH1Q8WYR4 309 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 CPT1BQ92523 772 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 CCDC77Q9BR77 488 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 ULBP1Q9BZM6 244 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 CCDC134Q9H6E4 229 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 MTMR10Q9NXD2 777 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 FZD10Q9ULW2 581 aa22.58■■□□□ 1.21
PDLIM2-216ENST00000464275 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 PRMT2P55345 433 aa22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 DAOAP59103 153 aa22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 PAN2Q504Q3 1202 aaKnown RBP22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 CCDC121Q6ZUS5 278 aa22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 SLC24A5Q71RS6 500 aa22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 NAT8LQ8N9F0 302 aa22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 MYLPFQ96A32 169 aa22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 CHMP6Q96FZ7 201 aa22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 PRDM16Q9HAZ2 1276 aa22.58■■□□□ 1.2
PDLIM2-216ENST00000464275 ALOX15BO15296 676 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 SLCO1A2P46721 670 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 MBTPS1Q14703 1052 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 STAT4Q14765 748 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 LONRF1Q17RB8 773 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 SUSD3Q96L08 255 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 KCNK16Q96T55 309 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 CSNK1G1Q9HCP0 422 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 RCOR3Q9P2K3 495 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 HEY1Q9Y5J3 304 aa22.57■■□□□ 1.2
PDLIM2-216ENST00000464275 BCLAF3A2AJT9 711 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 ARVCFO00192 962 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 FKTNO75072 461 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 OTUD1Q5VV17 481 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 GLB1LQ6UWU2 654 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 THEM5Q8N1Q8 247 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 RTP4Q96DX8 246 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 USP29Q9HBJ7 922 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms