RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 KIF26AQ9ULI4 1882 aaPredicted RBP27.39■■□□□ 1.98
SURF1-203ENST00000463965 A0A1B0GTH6 734 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 SCAMP3O14828 347 aaKnown RBP27.39■■□□□ 1.98
SURF1-203ENST00000463965 LTFP02788 710 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 ZNF677Q86XU0 584 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 CCDC105Q8IYK2 499 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 ADGRG2Q8IZP9 1017 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 EDEM1Q92611 657 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 DCLK3Q9C098 648 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 SYNCQ9H7C4 482 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 CYTH4Q9UIA0 394 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 ZNF510Q9Y2H8 683 aa27.39■■□□□ 1.98
SURF1-203ENST00000463965 MTF2Q9Y483 593 aaPredicted RBP27.39■■□□□ 1.98
SURF1-203ENST00000463965 SLC12A8A0AV02 714 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 E5RJQ4 531 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 ADH1CP00326 375 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 GJA4P35212 333 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 FANCCQ00597 558 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 TAF3Q5VWG9 929 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 LRSAM1Q6UWE0 723 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 FMNL3Q8IVF7 1028 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 C1orf131Q8NDD1 294 aaKnown RBP27.38■■□□□ 1.97
SURF1-203ENST00000463965 IPO4Q8TEX9 1081 aaKnown RBP27.38■■□□□ 1.97
SURF1-203ENST00000463965 FAM149B1Q96BN6 582 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 ZNF318Q5VUA4 2279 aa27.38■■□□□ 1.97
SURF1-203ENST00000463965 A0A1W2PQC6 194 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 OTOL1A6NHN0 477 aaPredicted RBP27.37■■□□□ 1.97
SURF1-203ENST00000463965 SHISA7A6NL88 538 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 COL4A2P08572 1712 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 CCDC172P0C7W6 258 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 LRRC32Q14392 662 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 BBS7Q8IWZ6 715 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 WDTC1Q8N5D0 677 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 DTWD2Q8NBA8 298 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 MSANTD4Q8NCY6 345 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 EPS8L1Q8TE68 723 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 CLEC4CQ8WTT0 213 aa27.37■■□□□ 1.97
SURF1-203ENST00000463965 NAP1L5Q96NT1 182 aaPredicted RBP27.37■■□□□ 1.97
SURF1-203ENST00000463965 HBS1LQ9Y450 684 aaKnown RBP27.37■■□□□ 1.97
SURF1-203ENST00000463965 STC2O76061 302 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 LSM8O95777 96 aaKnown RBP27.36■■□□□ 1.97
SURF1-203ENST00000463965 UBASH3AP57075 661 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 GRSF1Q12849 480 aaKnown RBP eCLIP27.36■■□□□ 1.974e-7■■■■□ 25.6
SURF1-203ENST00000463965 NR1I3Q14994 352 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 PON2Q15165 354 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 DHCR24Q15392 516 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 TXNDC11Q6PKC3 985 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 NOP9Q86U38 636 aaKnown RBP27.36■■□□□ 1.97
SURF1-203ENST00000463965 CLDN23Q96B33 292 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 PLD4Q96BZ4 506 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 CPXM1Q96SM3 734 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 LMAN1LQ9HAT1 526 aa27.36■■□□□ 1.97
SURF1-203ENST00000463965 CAPN9O14815 690 aa27.35■■□□□ 1.97
SURF1-203ENST00000463965 PAPSS1O43252 624 aaPredicted RBP27.35■■□□□ 1.97
SURF1-203ENST00000463965 GALR2O43603 387 aaPredicted RBP27.35■■□□□ 1.97
SURF1-203ENST00000463965 CYP17A1P05093 508 aa27.35■■□□□ 1.97
SURF1-203ENST00000463965 HMBSP08397 361 aa27.35■■□□□ 1.97
SURF1-203ENST00000463965 NCAM1P13591 858 aa27.35■■□□□ 1.97
SURF1-203ENST00000463965 RPS9P46781 194 aaKnown RBP27.35■■□□□ 1.97
SURF1-203ENST00000463965 DGKKQ5KSL6 1271 aa27.35■■□□□ 1.97
SURF1-203ENST00000463965 MSANTD2Q6P1R3 559 aa27.35■■□□□ 1.97
SURF1-203ENST00000463965 DDX1Q92499 740 aaKnown RBP27.35■■□□□ 1.97
SURF1-203ENST00000463965 WBP2Q969T9 261 aa27.35■■□□□ 1.97
SURF1-203ENST00000463965 TRDMT1O14717 391 aaKnown RBP27.34■■□□□ 1.97
SURF1-203ENST00000463965 CDH5P33151 784 aaPredicted RBP27.34■■□□□ 1.97
SURF1-203ENST00000463965 HARS2P49590 506 aaKnown RBP27.34■■□□□ 1.97
SURF1-203ENST00000463965 CDR2Q01850 454 aa27.34■■□□□ 1.97
SURF1-203ENST00000463965 GAD2Q05329 585 aa27.34■■□□□ 1.97
SURF1-203ENST00000463965 EFHC1Q5JVL4 640 aa27.34■■□□□ 1.97
SURF1-203ENST00000463965 BEND5Q7L4P6 421 aa27.34■■□□□ 1.97
SURF1-203ENST00000463965 P2RY13Q9BPV8 354 aa27.34■■□□□ 1.97
SURF1-203ENST00000463965 DLGAP2Q9P1A6 1054 aa27.34■■□□□ 1.97
SURF1-203ENST00000463965 SFMBT1Q9UHJ3 866 aa27.34■■□□□ 1.97
SURF1-203ENST00000463965 MYO6Q9UM54 1294 aa27.34■■□□□ 1.97
SURF1-203ENST00000463965 TPM3P06753 285 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 GLI1P08151 1106 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 MMEP08473 750 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 ADH5P11766 374 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 CORO1AP31146 461 aaKnown RBP27.33■■□□□ 1.97
SURF1-203ENST00000463965 YWHAZP63104 245 aaKnown RBP27.33■■□□□ 1.97
SURF1-203ENST00000463965 ARID5AQ03989 594 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 LY6G5CQ5SRR4 150 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 OR6B2Q6IFH4 312 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 RHBDF2Q6PJF5 856 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 TRIM72Q6ZMU5 477 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 TOGARAM2Q6ZUX3 1019 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 ERICH1Q86X53 443 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 ZDHHC17Q8IUH5 632 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 CD101Q93033 1021 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 IER2Q9BTL4 223 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 POPDC2Q9HBU9 364 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 SPHK2Q9NRA0 654 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 NOCTQ9UK39 431 aaKnown RBP27.33■■□□□ 1.97
SURF1-203ENST00000463965 COL4A3Q01955 1670 aa27.33■■□□□ 1.97
SURF1-203ENST00000463965 MIA3Q5JRA6 1907 aa27.32■■□□□ 1.96
SURF1-203ENST00000463965 GREM1O60565 184 aa27.32■■□□□ 1.96
SURF1-203ENST00000463965 CHRNB1P11230 501 aa27.32■■□□□ 1.96
SURF1-203ENST00000463965 FERP16591 822 aa27.32■■□□□ 1.96
SURF1-203ENST00000463965 DRD1P21728 446 aa27.32■■□□□ 1.96
SURF1-203ENST00000463965 GALK1P51570 392 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms