RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 NEDD8-MDP1E9PL57 170 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 TYRP14679 529 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 CREB5Q02930 508 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 LRMPQ12912 555 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 STIM1Q13586 685 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 C10orf76Q5T2E6 689 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 GRAMD4Q6IC98 578 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 Q6ZNB5 142 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 C11orf74Q86VG3 221 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 MIB1Q86YT6 1006 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 ELOA2Q8IYF1 753 aaPredicted RBP19.82■□□□□ 0.76
SF3A1-205ENST00000463818 TERB1Q8NA31 727 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 OLIG1Q8TAK6 271 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 SLC35C1Q96A29 364 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 XPO6Q96QU8 1125 aaKnown RBP19.82■□□□□ 0.76
SF3A1-205ENST00000463818 DNAJC17Q9NVM6 304 aaKnown RBP19.82■□□□□ 0.76
SF3A1-205ENST00000463818 MARK1Q9P0L2 795 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 MAN1B1Q9UKM7 699 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 HCN2Q9UL51 889 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 MYOFQ9NZM1 2061 aa19.82■□□□□ 0.76
SF3A1-205ENST00000463818 BCLAF3A2AJT9 711 aaKnown RBP19.81■□□□□ 0.76
SF3A1-205ENST00000463818 PSMA7O14818 248 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 STC2O76061 302 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 CAVIN2O95810 425 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 CD44P16070 742 aaKnown RBP19.81■□□□□ 0.76
SF3A1-205ENST00000463818 BCKDHBP21953 392 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 SLC8A3P57103 927 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 EFEMP1Q12805 493 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 RAB41Q5JT25 222 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 PMS2CLQ68D20 193 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 ZNF513Q8N8E2 541 aaPredicted RBP19.81■□□□□ 0.76
SF3A1-205ENST00000463818 CDK5RAP1Q96SZ6 601 aaKnown RBP19.81■□□□□ 0.76
SF3A1-205ENST00000463818 METTL14Q9HCE5 456 aaKnown RBP19.81■□□□□ 0.76
SF3A1-205ENST00000463818 RASAL2Q9UJF2 1139 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 STARD13Q9Y3M8 1113 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 NCOR2Q9Y618 2525 aa19.81■□□□□ 0.76
SF3A1-205ENST00000463818 SPTBN2O15020 2390 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 TCRBV21S2A2A0A5A6 115 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 TULP2O00295 520 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 CACNG3O60359 315 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 KLKB1P03952 638 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 LIMK1P53667 647 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 YWHAEP62258 255 aaKnown RBP19.8■□□□□ 0.76
SF3A1-205ENST00000463818 COG7P83436 770 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 SGO2Q562F6 1265 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 TRMT11Q7Z4G4 463 aaKnown RBP19.8■□□□□ 0.76
SF3A1-205ENST00000463818 PGBD3Q8N328 593 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 ARHGAP18Q8N392 663 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 HMGB4Q8WW32 186 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 RLN3Q8WXF3 142 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 CEP63Q96MT8 703 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 BCCIPQ9P287 314 aaKnown RBP eCLIP19.8■□□□□ 0.76
SF3A1-205ENST00000463818 CIZ1Q9ULV3 898 aaPredicted RBP19.8■□□□□ 0.76
SF3A1-205ENST00000463818 ZNF510Q9Y2H8 683 aa19.8■□□□□ 0.76
SF3A1-205ENST00000463818 HMBSP08397 361 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 CISD3P0C7P0 127 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 CD19P15391 556 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 NTSR1P30989 418 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 P2RY2P41231 377 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 WASP42768 502 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 FMO5P49326 533 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 TKTL1P51854 596 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 PDE4CQ08493 712 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 GOLGA7BQ2TAP0 167 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 PPM1JQ5JR12 505 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 STPG1Q5TH74 334 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 IL31Q6EBC2 164 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 PM20D1Q6GTS8 502 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 TCEAL6Q6IPX3 200 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 KLHL10Q6JEL2 608 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 TOGARAM2Q6ZUX3 1019 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 NDRG1Q92597 394 aaKnown RBP19.79■□□□□ 0.76
SF3A1-205ENST00000463818 BHMTQ93088 406 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 TCEAL3Q969E4 200 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 PLK2Q9NYY3 685 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 HESX1Q9UBX0 185 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 TSPAN16Q9UKR8 245 aa19.79■□□□□ 0.76
SF3A1-205ENST00000463818 PPP1R3GB7ZBB8 358 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 PRRT4C9JH25 899 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 XPO1O14980 1071 aaKnown RBP19.78■□□□□ 0.76
SF3A1-205ENST00000463818 MAP3K13O43283 966 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 ZBED1O96006 694 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 VDRP11473 427 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 PPP1R2P41236 205 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 YWHAGP61981 247 aaKnown RBP eCLIP19.78■□□□□ 0.76
SF3A1-205ENST00000463818 CCDC40Q4G0X9 1142 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 EGFLAMQ63HQ2 1017 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 RSRC2Q7L4I2 434 aaKnown RBP19.78■□□□□ 0.76
SF3A1-205ENST00000463818 UBR7Q8N806 425 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 FRMD1Q8N878 549 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 UBA3Q8TBC4 463 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 P2RY11Q96G91 374 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 ACOX2Q99424 681 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 ULBP1Q9BZM6 244 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 DCLK3Q9C098 648 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 MARCH2Q9P0N8 246 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 KIAA1257Q9ULG3 409 aa19.78■□□□□ 0.76
SF3A1-205ENST00000463818 RALGAPA1Q6GYQ0 2036 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 SLC12A8A0AV02 714 aa19.77■□□□□ 0.76
SF3A1-205ENST00000463818 TM4SF5O14894 197 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms