RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 ZNF33AQ06730 810 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 UNQ6494/PRO21346Q6UXR6 183 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 CLEC20AQ6ZU45 233 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 TOGARAM2Q6ZUX3 1019 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 HTR3DQ70Z44 454 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 RSRC2Q7L4I2 434 aaKnown RBP12.98□□□□□ -0.33
RPA3-206ENST00000463632 FAM186BQ8IYM0 893 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 PHTF2Q8N3S3 785 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 CEP76Q8TAP6 659 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 IPO4Q8TEX9 1081 aaKnown RBP12.98□□□□□ -0.33
RPA3-206ENST00000463632 ACOX2Q99424 681 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 HNRNPABQ99729 332 aaKnown RBP12.98□□□□□ -0.33
RPA3-206ENST00000463632 NIF3L1Q9GZT8 377 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 CYP3A43Q9HB55 503 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 NMUR1Q9HB89 426 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 CSNK1G1Q9HCP0 422 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 SLC6A14Q9UN76 642 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 PCDHA5Q9Y5H7 936 aa12.98□□□□□ -0.33
RPA3-206ENST00000463632 ZNF638Q14966 1978 aaKnown RBP12.98□□□□□ -0.33
RPA3-206ENST00000463632 FAM92AA1XBS5 289 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 OPHN1O60890 802 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 TOP3BO95985 862 aaKnown RBP12.97□□□□□ -0.33
RPA3-206ENST00000463632 PROS1P07225 676 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 NDUFV2P19404 249 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 CMA1P23946 247 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 PSMC2P35998 433 aaKnown RBP12.97□□□□□ -0.33
RPA3-206ENST00000463632 KRT85P78386 507 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 ARID5AQ03989 594 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 EFEMP1Q12805 493 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 STARD3Q14849 445 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 SYCP2LQ5T4T6 812 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 INTS8Q75QN2 995 aaKnown RBP12.97□□□□□ -0.33
RPA3-206ENST00000463632 TRIML1Q8N9V2 468 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 TAS1R2Q8TE23 839 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 HSPA12BQ96MM6 686 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 TWNKQ96RR1 684 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 SLC6A17Q9H1V8 727 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 APOBEC3GQ9HC16 384 aaKnown RBP12.97□□□□□ -0.33
RPA3-206ENST00000463632 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 OSER1Q9NX31 292 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 PILRBQ9UKJ0 227 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 STRIP2Q9ULQ0 834 aa12.97□□□□□ -0.33
RPA3-206ENST00000463632 EPG5Q9HCE0 2579 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 IGHV1OR15-9A0A0B4J2B8 117 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 SPAARA0A1B0GVQ0 90 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 PRRT4C9JH25 899 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 CACNG3O60359 315 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
RPA3-206ENST00000463632 CYBBP04839 570 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 MYL1P05976 194 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 SLC8A3P57103 927 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 SIM1P81133 766 aaPredicted RBP12.96□□□□□ -0.33
RPA3-206ENST00000463632 ADAM9Q13443 819 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 PLEKHG6Q3KR16 790 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 SPDYCQ5MJ68 293 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 RABEPKQ7Z6M1 372 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 UCMAQ8WVF2 138 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 SCNM1Q9BWG6 230 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
RPA3-206ENST00000463632 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.96□□□□□ -0.33
RPA3-206ENST00000463632 RALGAPA1Q6GYQ0 2036 aa12.96□□□□□ -0.34
RPA3-206ENST00000463632 A0A1W2PQF6 199 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 SLC12A8A0AV02 714 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 MEI4A8MW99 385 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 WASH3PC4AMC7 463 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 STC2O76061 302 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 SYPP08247 313 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 GNSP15586 552 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 CORO1AP31146 461 aaKnown RBP12.95□□□□□ -0.34
RPA3-206ENST00000463632 PSEN1P49768 467 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 NDUFA8P51970 172 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 COG7P83436 770 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 PPP3CAQ08209 521 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 C1orf220Q5T0J3 134 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 PPP1R26Q5T8A7 1209 aaPredicted RBP12.95□□□□□ -0.34
RPA3-206ENST00000463632 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 SLC23A3Q6PIS1 610 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 MINDY1Q8N5J2 469 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 OR2I1PQ8NGU4 316 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 EEF2KMTQ96G04 330 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 CCDC34Q96HJ3 373 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 CDK5RAP1Q96SZ6 601 aaKnown RBP12.95□□□□□ -0.34
RPA3-206ENST00000463632 DUSP16Q9BY84 665 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 CIPCQ9C0C6 399 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 MIR1-1HGQ9H1L0 117 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 RALYQ9UKM9 306 aaKnown RBP12.95□□□□□ -0.34
RPA3-206ENST00000463632 ZMIZ1Q9ULJ6 1067 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 TRAF3IP3Q9Y228 551 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 ZNF510Q9Y2H8 683 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 STARD13Q9Y3M8 1113 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 PCDHB9Q9Y5E1 797 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 STON1Q9Y6Q2 735 aa12.95□□□□□ -0.34
RPA3-206ENST00000463632 CNOT1A5YKK6 2376 aaKnown RBP12.94□□□□□ -0.34
RPA3-206ENST00000463632 HHLA1C9JL84 531 aa12.94□□□□□ -0.34
RPA3-206ENST00000463632 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
RPA3-206ENST00000463632 CILPO75339 1184 aa12.94□□□□□ -0.34
RPA3-206ENST00000463632 SERPINF2P08697 491 aa12.94□□□□□ -0.34
RPA3-206ENST00000463632 EPB41P11171 864 aaKnown RBP12.94□□□□□ -0.34
RPA3-206ENST00000463632 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms