RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BRDTQ58F21 947 aaPredicted RBP4.09□□□□□ -1.76
SCFD1-204ENST00000463622 MUM1L1Q5H9M0 696 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 EARS2Q5JPH6 523 aaKnown RBP4.09□□□□□ -1.76
SCFD1-204ENST00000463622 ZBTB41Q5SVQ8 909 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 FKBP15Q5T1M5 1219 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 CCDC62Q6P9F0 684 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.09□□□□□ -1.764e-10■■■■□ 25.5
SCFD1-204ENST00000463622 ASCL5Q7RTU5 278 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 JAZF1Q86VZ6 243 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 PIK3C3Q8NEB9 887 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 CHURC1Q8WUH1 139 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 KAT2BQ92831 832 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 MSLNLQ96KJ4 702 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 PIGSQ96S52 555 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 GPR87Q9BY21 358 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 JMJD4Q9H9V9 463 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 VAT1LQ9HCJ6 419 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 HOMER2Q9NSB8 354 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 PARP14Q460N5 1801 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 ERICH2A1L162 156 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 TMEM232C9JQI7 657 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 KLRF2D3W0D1 207 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 EDIL3O43854 480 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 EIF5BO60841 1220 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 JUNP05412 331 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 RB1P06400 928 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 PARP1P09874 1014 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 IFNAR1P17181 557 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 MCM7P33993 719 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 SLC1A4P43007 532 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 PTTG1IPP53801 180 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 VCPP55072 806 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 SIGLEC14Q08ET2 396 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 HYAL1Q12794 435 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 BAATQ14032 418 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 SART3Q15020 963 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ANKRD1Q15327 319 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 CRB2Q5IJ48 1285 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 FAM173BQ6P4H8 233 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF627Q7L945 461 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 CATIPQ7Z7H3 387 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 RPAINQ86UA6 219 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 FAM160B2Q86V87 743 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 SUGP1Q8IWZ8 645 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ZZZ3Q8IYH5 903 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ADGRF4Q8IZF3 695 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 EFHBQ8N7U6 833 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 DBF4BQ8NFT6 615 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 OR6J1Q8NGC5 347 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 TBC1D5Q92609 795 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 LARP4BQ92615 738 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ATOH1Q92858 354 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 TOP1MTQ969P6 601 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ARL8AQ96BM9 186 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 MTMR8Q96EF0 704 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF512Q96ME7 567 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ORAI3Q9BRQ5 295 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 SLC26A6Q9BXS9 759 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 LMAN2LQ9H0V9 348 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 IKZF4Q9H2S9 585 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF703Q9H7S9 590 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF287Q9HBT7 754 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 PARPBPQ9NWS1 579 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 VPS54Q9P1Q0 977 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ADD3Q9UEY8 706 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 KCNJ14Q9UNX9 436 aa4.08□□□□□ -1.76
SCFD1-204ENST00000463622 ZNFX1Q9P2E3 1918 aaKnown RBP4.08□□□□□ -1.76
SCFD1-204ENST00000463622 PRR23AA6NEV1 266 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 HAS3O00219 553 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 GAAP10253 952 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ALAS1P13196 640 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 HK1P19367 917 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 CD40P25942 277 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 BMPR1AP36894 532 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 MAN2A2P49641 1150 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ALDH5A1P51649 535 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 CAMK1Q14012 370 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 QRICH1Q2TAL8 776 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 GAGE13Q4V321 117 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 PLEKHG4Q58EX7 1191 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF618Q5T7W0 954 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 SYDE2Q5VT97 1194 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 BTNL9Q6UXG8 535 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 CMTM4Q8IZR5 234 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 SYNPOQ8N3V7 929 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 SCFD2Q8WU76 684 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 CHFRQ96EP1 664 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 PGBD1Q96JS3 809 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 HIST1H2AHQ96KK5 128 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ZSCAN31Q96LW9 406 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 HIST1H2AJQ99878 128 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ANO3Q9BYT9 981 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 RIOX1Q9H6W3 641 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ORC3Q9UBD5 711 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 CD207Q9UJ71 328 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 ISY1Q9ULR0 285 aaKnown RBP4.07□□□□□ -1.76
SCFD1-204ENST00000463622 MTMR6Q9Y217 621 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 FAM186AA6NE01 2351 aa4.07□□□□□ -1.76
SCFD1-204ENST00000463622 TET1Q8NFU7 2136 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms