RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 FAM131BQ86XD5 332 aa10.58□□□□□ -0.72
MSH5-211ENST00000463144 ANKMY2Q8IV38 441 aa10.58□□□□□ -0.72
MSH5-211ENST00000463144 ZNF473Q8WTR7 871 aaKnown RBP10.58□□□□□ -0.72
MSH5-211ENST00000463144 ARHGEF2Q92974 986 aaKnown RBP10.58□□□□□ -0.72
MSH5-211ENST00000463144 FAM149B1Q96BN6 582 aa10.58□□□□□ -0.72
MSH5-211ENST00000463144 NPY6RQ99463 290 aa10.58□□□□□ -0.72
MSH5-211ENST00000463144 UBN1Q9NPG3 1134 aa10.58□□□□□ -0.72
MSH5-211ENST00000463144 CWC15Q9P013 229 aaKnown RBP10.58□□□□□ -0.72
MSH5-211ENST00000463144 LGALS13Q9UHV8 139 aa10.58□□□□□ -0.72
MSH5-211ENST00000463144 ZMYND8Q9ULU4 1186 aaPredicted RBP10.58□□□□□ -0.72
MSH5-211ENST00000463144 MFHAS1Q9Y4C4 1052 aa10.58□□□□□ -0.72
MSH5-211ENST00000463144 USP3Q9Y6I4 520 aa10.58□□□□□ -0.72
MSH5-211ENST00000463144 CLUHO75153 1309 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 A0A087WUV0 522 aaPredicted RBP10.57□□□□□ -0.72
MSH5-211ENST00000463144 BCLAF3A2AJT9 711 aaKnown RBP10.57□□□□□ -0.72
MSH5-211ENST00000463144 GMNCA6NCL1 334 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 HHLA1C9JL84 531 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 E7ESA3 106 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 CAPN15O75808 1086 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 AP1G2O75843 785 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 DESP17661 470 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 NOS2P35228 1153 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 RAB27AP51159 221 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 SLC8A3P57103 927 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 MTM1Q13496 603 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 HIF1AQ16665 826 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 VSTM1Q6UX27 236 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 CAPN12Q6ZSI9 719 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 CTU1Q7Z7A3 348 aaKnown RBP10.57□□□□□ -0.72
MSH5-211ENST00000463144 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
MSH5-211ENST00000463144 RTN4RL1Q86UN2 441 aaPredicted RBP10.57□□□□□ -0.72
MSH5-211ENST00000463144 CD99L2Q8TCZ2 262 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 MAML1Q92585 1016 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 RTP4Q96DX8 246 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 CSPG4P5Q96PW8 444 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 XPO6Q96QU8 1125 aaKnown RBP10.57□□□□□ -0.72
MSH5-211ENST00000463144 RHOBTB2Q9BYZ6 727 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 STMN4Q9H169 189 aaPredicted RBP10.57□□□□□ -0.72
MSH5-211ENST00000463144 LRRC4Q9HBW1 653 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 ETNK2Q9NVF9 386 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 TBK1Q9UHD2 729 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 CDH9Q9ULB4 789 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 FZD10Q9ULW2 581 aa10.57□□□□□ -0.72
MSH5-211ENST00000463144 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.56□□□□□ -0.72
MSH5-211ENST00000463144 F8W810 466 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 NDC80O14777 642 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 KCNN4O15554 427 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 FAM107AO95990 144 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 GOT1P17174 413 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 AMPD1P23109 780 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 MPP2Q14168 576 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 MBTPS1Q14703 1052 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 RAB41Q5JT25 222 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 SYCP2LQ5T4T6 812 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 TRAF7Q6Q0C0 670 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 ECHDC2Q86YB7 292 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 CCDC33Q8N5R6 958 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 CAPNS2Q96L46 248 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 TTC25Q96NG3 672 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 SLC2A13Q96QE2 648 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 ULBP1Q9BZM6 244 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 XPO7Q9UIA9 1087 aaKnown RBP10.56□□□□□ -0.72
MSH5-211ENST00000463144 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 YJEFN3A6XGL0 299 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 E7ENQ6 273 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 CDH16O75309 829 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 B3GAT3O94766 335 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 ITGB1P05556 798 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 CKBP12277 381 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 APLP1P51693 650 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 ARL4CP56559 192 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 DAOAP59103 153 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 BASP1P80723 227 aaKnown RBP10.56□□□□□ -0.72
MSH5-211ENST00000463144 KCNJ11Q14654 390 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 QPCTQ16769 361 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 BHLHA9Q7RTU4 235 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 RNF180Q86T96 592 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 IGDCC3Q8IVU1 814 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 SIX6OS1Q8N1H7 587 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 HASPINQ8TF76 798 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 PHACTR1Q9C0D0 580 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 TRPV6Q9H1D0 765 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 TMLHEQ9NVH6 421 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 NOD1Q9Y239 953 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 INPP5FQ9Y2H2 1132 aa10.56□□□□□ -0.72
MSH5-211ENST00000463144 SYNJ2BP-COX16A0A087WUM0 186 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 M0QYT0 321 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 B4GALT3O60512 393 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 TRPA1O75762 1119 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 AMHP03971 560 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 CYP11A1P05108 521 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 SSTR1P30872 391 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 GRIK3Q13003 919 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 DEFB115Q30KQ5 88 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 NCBP2-AS2Q69YL0 99 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 FAM171BQ6P995 826 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 TAOK1Q7L7X3 1001 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 AGGF1Q8N302 714 aaeCLIP10.55□□□□□ -0.726e-11■■□□□ 13.8
MSH5-211ENST00000463144 PGBD4Q96DM1 585 aa10.55□□□□□ -0.72
MSH5-211ENST00000463144 ZNF317Q96PQ6 595 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms