RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 AK2P54819 239 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 IRX4P78413 519 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 TOP3AQ13472 1001 aaPredicted RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 NOLC1Q14978 699 aaKnown RBP eCLIP3.24□□□□□ -1.89
CD46-210ENST00000462968 KARSQ15046 597 aaKnown RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 PGM5Q15124 567 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 TAF1BQ53T94 588 aaPredicted RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 CLLU1OSQ5K130 101 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 DGKKQ5KSL6 1271 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 SPATA31D4Q6ZUB0 917 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 STOX1Q6ZVD7 989 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 GRASPQ7Z6J2 395 aaPredicted RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 ECHDC2Q86YB7 292 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 TRIM59Q8IWR1 403 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 TRIM48Q8IWZ4 208 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 SYNPOQ8N3V7 929 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 RNF169Q8NCN4 708 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 GPR150Q8NGU9 434 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 CFHR4Q92496 578 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 ZBTB10Q96DT7 871 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 MSANTD3Q96H12 275 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 STRBPQ96SI9 672 aaKnown RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 DNAJC2Q99543 621 aaKnown RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 TRMT61BQ9BVS5 477 aaKnown RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 VN1R3Q9BXE9 311 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 CDIP1Q9H305 208 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 SMARCAD1Q9H4L7 1026 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 BRD9Q9H8M2 597 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 PARPBPQ9NWS1 579 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 MAP3K20Q9NYL2 800 aaKnown RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 GPRC5BQ9NZH0 403 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 PTGFRNQ9P2B2 879 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 ARHGAP20Q9P2F6 1191 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 MRPL11Q9Y3B7 192 aaKnown RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 PCDHA1Q9Y5I3 950 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 PIAS3Q9Y6X2 628 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 TEP1Q99973 2627 aaKnown RBP3.24□□□□□ -1.89
CD46-210ENST00000462968 SPTA1P02549 2419 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 RELNP78509 3460 aa3.24□□□□□ -1.89
CD46-210ENST00000462968 MYO9AB2RTY4 2548 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 A0A0U1RQF3 1178 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 TRABD2BA6NFA1 517 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 TSPY2A6NKD2 308 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 MASP2O00187 686 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 RRP8O43159 456 aaKnown RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 FIBPO43427 364 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 TGM5O43548 720 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 EXTL3O43909 919 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 NMT2O60551 498 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 CUTAO60888 179 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 STAM2O75886 525 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 SOD2P04179 222 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ALDH2P05091 517 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 HNRNPA1P09651 372 aaKnown RBP eCLIP3.23□□□□□ -1.89
CD46-210ENST00000462968 PDHBP11177 359 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ITPKBP27987 946 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 HOXC13P31276 330 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 EIF2S3P41091 472 aaKnown RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 SLC11A1P49279 550 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 HSD17B4P51659 736 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 CRYBB1P53674 252 aaPredicted RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 FAM193AP78312 1265 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 SP4Q02446 784 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 GHRHRQ02643 423 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ZNF543Q08ER8 600 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 LSAMPQ13449 338 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 TRIP6Q15654 476 aaKnown RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 KRTAP21-3Q3LHN1 58 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ALDH1L2Q3SY69 923 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ZMAT1Q5H9K5 638 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ACBD5Q5T8D3 534 aaPredicted RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 PAPD7Q5XG87 772 aaKnown RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 TANGO2Q6ICL3 276 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ZSCAN25Q6NSZ9 544 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 Q6ZS52 159 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 AACSQ86V21 672 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 C11orf74Q86VG3 221 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 FAM228AQ86W67 206 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 PALB2Q86YC2 1186 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 HDDC3Q8N4P3 179 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 CAMKK1Q8N5S9 505 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 SAMD3Q8N6K7 520 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 PNPLA1Q8N8W4 532 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ITFG1Q8TB96 612 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 SEPT1Q8WYJ6 367 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ELSPBP1Q96BH3 223 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 INPP4AQ96PE3 977 aaPredicted RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 SENP7Q9BQF6 1050 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 NUSAP1Q9BXS6 441 aaKnown RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 PLA2G2FQ9BZM2 168 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 API5Q9BZZ5 524 aaKnown RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 PUS7LQ9H0K6 701 aaKnown RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 NRDE2Q9H7Z3 1164 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 PLXNA4Q9HCM2 1894 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 ZNF334Q9HCZ1 680 aaPredicted RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 IL17RBQ9NRM6 502 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 RBM12Q9NTZ6 932 aaKnown RBP3.23□□□□□ -1.89
CD46-210ENST00000462968 C2orf42Q9NWW7 574 aa3.23□□□□□ -1.89
CD46-210ENST00000462968 PLA2G3Q9NZ20 509 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms