RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 NT5DC3Q86UY8 548 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 RHOT1Q8IXI2 618 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 C17orf53Q8N3J3 647 aaPredicted RBP11.14□□□□□ -0.63
RTF1-202ENST00000462276 EMC1Q8N766 993 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 UBL4BQ8N7F7 174 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 NDRG1Q92597 394 aaKnown RBP11.14□□□□□ -0.63
RTF1-202ENST00000462276 PIWIL1Q96J94 861 aaKnown RBP11.14□□□□□ -0.63
RTF1-202ENST00000462276 TUBB2BQ9BVA1 445 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 LRRC3Q9BY71 257 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 NMUR1Q9HB89 426 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 IL21Q9HBE4 155 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 NAALADL1Q9UQQ1 740 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 HBS1LQ9Y450 684 aaKnown RBP11.14□□□□□ -0.63
RTF1-202ENST00000462276 MTCH2Q9Y6C9 303 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 CAPN6Q9Y6Q1 641 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 M0QYT0 321 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 CCL16O15467 120 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 PSTPIP1O43586 416 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 PRPSAP2O60256 369 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 TRUB2O95900 331 aaKnown RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 IGLV3-25P01717 112 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 CASQ1P31415 396 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 ZNF135P52742 658 aaPredicted RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 OGDHQ02218 1023 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 DEUP1Q05D60 604 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 RING1Q06587 406 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 PPP2R5DQ14738 602 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 CLUL1Q15846 466 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 CTC1Q2NKJ3 1217 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 ARL13BQ3SXY8 428 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 ARHGAP15Q53QZ3 475 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 BRMS1LQ5PSV4 323 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 MEI1Q5TIA1 1274 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 SYPL2Q5VXT5 272 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 ANKRD54Q6NXT1 300 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 CC2D1AQ6P1N0 951 aaPredicted RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 HFE2Q6ZVN8 426 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 GPR149Q86SP6 731 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 TMC8Q8IU68 726 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 KIAA1958Q8N8K9 716 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 VN1R2Q8NFZ6 395 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 KIF18AQ8NI77 898 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 DQX1Q8TE96 717 aaKnown RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 FAM172AQ8WUF8 416 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 TEKT4Q8WW24 435 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 SMG7Q92540 1137 aaKnown RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 ZNF707Q96C28 371 aaPredicted RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 HES6Q96HZ4 224 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 CFAP57Q96MR6 1250 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 NAPGQ99747 312 aaPredicted RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 CORO1BQ9BR76 489 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 TRIM7Q9C029 511 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 NACA2Q9H009 215 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 PIDD1Q9HB75 910 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.13□□□□□ -0.63
RTF1-202ENST00000462276 DDIT4Q9NX09 232 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 DDX56Q9NY93 547 aaKnown RBP11.13□□□□□ -0.63
RTF1-202ENST00000462276 MARCH2Q9P0N8 246 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 SLC12A6Q9UHW9 1150 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 TLR6Q9Y2C9 796 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 PCDHA3Q9Y5H8 950 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 MYO7AQ13402 2215 aa11.13□□□□□ -0.63
RTF1-202ENST00000462276 FAM170AA1A519 330 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 SOX1O00570 391 aaPredicted RBP11.12□□□□□ -0.63
RTF1-202ENST00000462276 CES2O00748 559 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 LRCH4O75427 683 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 RFPL2O75678 378 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 GJB6O95452 261 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 OAS1P00973 400 aaKnown RBP11.12□□□□□ -0.63
RTF1-202ENST00000462276 RHOP08100 348 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 TNNT1P13805 278 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 TCP1P17987 556 aaKnown RBP11.12□□□□□ -0.63
RTF1-202ENST00000462276 CTNNA2P26232 953 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 GABRR2P28476 465 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 WEE1P30291 646 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 MIPP30301 263 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 CCR1P32246 355 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 CTNNA1P35221 906 aaKnown RBP11.12□□□□□ -0.63
RTF1-202ENST00000462276 CETN2P41208 172 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 CXCR3P49682 368 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 SULT1E1P49888 294 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 ATP11AP98196 1134 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 ZNF252P-AS1Q0IIN9 211 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 EIF4EBP2Q13542 120 aaPredicted RBP11.12□□□□□ -0.63
RTF1-202ENST00000462276 ATAT1Q5SQI0 421 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 CES5AQ6NT32 575 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 GAREM2Q75VX8 874 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 TMEM150AQ86TG1 271 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 VSIG1Q86XK7 387 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 MAP7D3Q8IWC1 876 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 UNC45BQ8IWX7 931 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 SLC35F6Q8N357 371 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 EDEM1Q92611 657 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 CD101Q93033 1021 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 NTAN1Q96AB6 310 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 PABPC5Q96DU9 382 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms