RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 EIF3CQ99613 913 aaKnown RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 C17orf80Q9BSJ5 609 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TEX101Q9BY14 249 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TWSG1Q9GZX9 223 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 ZHX3Q9H4I2 956 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 ELAC1Q9H777 363 aaKnown RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 NOD2Q9HC29 1040 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 SNX15Q9NRS6 342 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 LIN7CQ9NUP9 197 aaKnown RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 C9orf78Q9NZ63 289 aaPredicted RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 PI4KBQ9UBF8 816 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 LPAR3Q9UBY5 353 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 GABRQQ9UN88 632 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 SLC27A6Q9Y2P4 619 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 MAP3K2Q9Y2U5 619 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 A1L4Q6 167 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 PIPSLA2A3N6 862 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 RRN3P2A6NIE6 340 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 SAC3D1A6NKF1 404 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 ZAR1LA6NP61 321 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 GCOM1H8Y6P7 765 aaPredicted RBP3.47□□□□□ -1.85
HDAC6-212ENST00000461608 PPM1DO15297 605 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 SEPT4O43236 478 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 DNPH1O43598 174 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 PEX1O43933 1283 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 CBFA2T3O75081 653 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 EGR2P11161 476 aaPredicted RBP3.47□□□□□ -1.85
HDAC6-212ENST00000461608 ITGAMP11215 1152 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 XBP1P17861 261 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 MAKP20794 623 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 MATN1P21941 496 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 SERPINA4P29622 427 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 FOLR3P41439 243 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 TUBA3CQ13748 450 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 BMPR2Q13873 1038 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 RPS6KA2Q15349 733 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 SF3B3Q15393 1217 aaKnown RBP3.47□□□□□ -1.85
HDAC6-212ENST00000461608 NAA35Q5VZE5 725 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 SLC9A4Q6AI14 798 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 DGAT2L7PQ6IED9 249 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 TUBA3EQ6PEY2 450 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 KRT27Q7Z3Y8 459 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 MOGAT3Q86VF5 341 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 CAND1Q86VP6 1230 aaKnown RBP3.47□□□□□ -1.85
HDAC6-212ENST00000461608 LRRC71Q8N4P6 559 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 SUPT20HQ8NEM7 779 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 SLC30A5Q8TAD4 765 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 GLG1Q92896 1179 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 COQ10AQ96MF6 247 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 PPM1MQ96MI6 270 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 PLEKHG4BQ96PX9 1271 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 TRAPPC9Q96Q05 1148 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 DPCDQ9BVM2 203 aaPredicted RBP3.47□□□□□ -1.85
HDAC6-212ENST00000461608 CINPQ9BW66 212 aaPredicted RBP3.47□□□□□ -1.85
HDAC6-212ENST00000461608 KCNK9Q9NPC2 374 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 WASH6PQ9NQA3 447 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 G6PC2Q9NQR9 355 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 ITM2CQ9NQX7 267 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 FEM1BQ9UK73 627 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 CNTN6Q9UQ52 1028 aa3.47□□□□□ -1.85
HDAC6-212ENST00000461608 MBD3L5A6NJ08 208 aaPredicted RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 C3orf70A6NLC5 250 aaPredicted RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 H0Y3Z8 333 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 YY2O15391 372 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 NARSO43776 548 aaKnown RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 TSPAN3O60637 253 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 RAMP2O60895 175 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 URI1O94763 535 aaPredicted RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 C1SP09871 688 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 NR4A1P22736 598 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 ADRA1DP25100 572 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 GKP32189 559 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 TXNL4AP83876 142 aaKnown RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 UBE3AQ05086 875 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 SF3A3Q12874 501 aaKnown RBP eCLIP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 EIF2B5Q13144 721 aaKnown RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 HNRNPA0Q13151 305 aaKnown RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 TRPC3Q13507 836 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 TP53BP2Q13625 1128 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 KCNJ12Q14500 433 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 PTPAQ15257 358 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 ANKRD1Q15327 319 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 TAF5Q15542 800 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 MAPRE1Q15691 268 aaKnown RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 SMAD1Q15797 465 aaKnown RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 TBCCQ15814 346 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 MAP3K21Q5TCX8 1036 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 KIAA0895LQ68EN5 471 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 ANKRD16Q6P6B7 361 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 CLEC9AQ6UXN8 241 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 ZNF551Q7Z340 670 aaPredicted RBP3.46□□□□□ -1.86
HDAC6-212ENST00000461608 ANKS1BQ7Z6G8 1248 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 GPR149Q86SP6 731 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 TMEM57Q8N5G2 664 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 SIRT6Q8N6T7 355 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 TOR1AIP2Q8NFQ8 470 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 HERVK_113Q902F9 699 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 LPIN2Q92539 896 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 C3orf49Q96BT1 292 aa3.46□□□□□ -1.86
HDAC6-212ENST00000461608 MPP4Q96JB8 637 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms