RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 MAPK1P28482 360 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 SOX5P35711 763 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 PDE6CP51160 858 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 NDST1P52848 882 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 CDH8P55286 799 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 GSDMDP57764 484 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 ERVFC1P60507 584 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 ZBED6P86452 979 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 INCA1Q0VD86 236 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 GPR17Q13304 367 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 RAB33AQ14088 237 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 MRPL58Q14197 206 aaKnown RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 VEPH1Q14D04 833 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 PTPN14Q15678 1187 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 ASIC2Q16515 512 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 RTP2Q5QGT7 225 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 PLPP4Q5VZY2 271 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 SLC8B1Q6J4K2 584 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 PRSS55Q6UWB4 352 aaPredicted RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 CD300LGQ6UXG3 332 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 TAS1R1Q7RTX1 841 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 APTXQ7Z2E3 356 aaKnown RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 TMC6Q7Z403 805 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 ACOT1Q86TX2 421 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 TMEM173Q86WV6 379 aaPredicted RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 ZNF677Q86XU0 584 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 VSTM4Q8IW00 320 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 FAM71AQ8IYT1 594 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 RBBP8NLQ8NC74 664 aaPredicted RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 B3GALNT2Q8NCR0 500 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 OR8K1Q8NGG5 319 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 MYCBPAPQ8TBZ2 947 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 SPPL2BQ8TCT7 592 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 EPS8L3Q8TE67 593 aaKnown RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 BCL7CQ8WUZ0 217 aaPredicted RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 CPLX3Q8WVH0 158 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 SHC3Q92529 594 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 SYN2Q92777 582 aaPredicted RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 FUBP3Q96I24 572 aaKnown RBP eCLIP6.29□□□□□ -1.4
NUP98-208ENST00000461047 CEP295NLQ96MC4 621 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 KLHL5Q96PQ7 755 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 ELOVL4Q9GZR5 314 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 MIS12Q9H081 205 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 PLEKHA4Q9H4M7 779 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 NSUN3Q9H649 340 aaKnown RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 SMYD3Q9H7B4 428 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 PIDD1Q9HB75 910 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 APOBEC3GQ9HC16 384 aaKnown RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 LUC7LQ9NQ29 371 aaKnown RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 CACNG4Q9UBN1 327 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 AFF4Q9UHB7 1163 aaKnown RBP6.29□□□□□ -1.4
NUP98-208ENST00000461047 CAPN11Q9UMQ6 739 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 CDY1Q9Y6F8 540 aa6.29□□□□□ -1.4
NUP98-208ENST00000461047 TET1Q8NFU7 2136 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 F8VZ95 297 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 F8W810 466 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 FOXN3O00409 490 aaPredicted RBP6.28□□□□□ -1.4
NUP98-208ENST00000461047 TEX28O15482 410 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 THAP12O43422 761 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 LRRN2O75325 713 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 IPO7O95373 1038 aaKnown RBP6.28□□□□□ -1.4
NUP98-208ENST00000461047 ECEL1O95672 775 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 EFEMP2O95967 443 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 LRG1P02750 347 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 PTMAP06454 111 aaKnown RBP6.28□□□□□ -1.4
NUP98-208ENST00000461047 CNPP09543 421 aaKnown RBP6.28□□□□□ -1.4
NUP98-208ENST00000461047 LINC00271P0C7V0 271 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 ATF2P15336 505 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 POU3F3P20264 500 aaPredicted RBP6.28□□□□□ -1.4
NUP98-208ENST00000461047 TNFAIP3P21580 790 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 GNA15P30679 374 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 RAP1GAPP47736 663 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 EPHB3P54753 998 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 ADCY1Q08828 1119 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 KLHL30Q0D2K2 578 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 GRM2Q14416 872 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 CNGA2Q16280 664 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 SLC39A12Q504Y0 691 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 ZNF394Q53GI3 561 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 MDH1BQ5I0G3 518 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 IQCEQ6IPM2 695 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 VSTM1Q6UX27 236 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 CYP26C1Q6V0L0 522 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 TRIM72Q6ZMU5 477 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 RBM23Q86U06 439 aaKnown RBP6.28□□□□□ -1.4
NUP98-208ENST00000461047 ITIH5Q86UX2 942 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 PALB2Q86YC2 1186 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 ARHGEF19Q8IW93 802 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 RNF168Q8IYW5 571 aaPredicted RBP6.28□□□□□ -1.4
NUP98-208ENST00000461047 DEFB123Q8N688 67 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 KREMEN2Q8NCW0 462 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 KBTBD7Q8WVZ9 684 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 CASP10Q92851 521 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 CYFIP2Q96F07 1278 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 SMARCD1Q96GM5 515 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 FAM84AQ96KN4 292 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 B3GALT6Q96L58 329 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 ZCWPW1Q9H0M4 648 aa6.28□□□□□ -1.4
NUP98-208ENST00000461047 GANQ9H2C0 597 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms