RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 WDR24Q96S15 920 aa3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 ELAC2Q9BQ52 826 aaKnown RBP3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 ZNF700Q9H0M5 742 aa3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 CERS4Q9HA82 394 aa3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 USP29Q9HBJ7 922 aa3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 TM7SF3Q9NS93 570 aa3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 RXFP3Q9NSD7 469 aa3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 RGL1Q9NZL6 768 aa3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 FZD4Q9ULV1 537 aa3.54□□□□□ -1.84
SCARNA18-201ENST00000459004 FAM234BA2RU67 622 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 TMEM232C9JQI7 657 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 PPP6CO00743 305 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 ZSCAN9O15535 394 aaPredicted RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 USP1O94782 785 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 IFIT2P09913 472 aaKnown RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 ATF7P17544 494 aaPredicted RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 EGR1P18146 543 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 YY1P25490 414 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 MST1P26927 711 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 PBX1P40424 430 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 CCDC15Q0P6D6 951 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 ATP1A4Q13733 1029 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 KCNJ12Q14500 433 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 MFSD13AQ14CX5 517 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 LARS2Q15031 903 aaKnown RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 SRSF7Q16629 238 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 MPEG1Q2M385 716 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 DGKKQ5KSL6 1271 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 ARL6IP4Q66PJ3 421 aaKnown RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 TLDC1Q6P9B6 456 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 FBXO38Q6PIJ6 1188 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 VSTM1Q6UX27 236 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 ZNF66Q6ZN08 573 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 NOL8Q76FK4 1167 aaKnown RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 P3H2Q8IVL5 708 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 C8orf58Q8NAV2 365 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 MAFAQ8NHW3 353 aaPredicted RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 DEPTORQ8TB45 409 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 GJA10Q969M2 543 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 EDC3Q96F86 508 aaKnown RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 KAZALD1Q96I82 304 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 C5orf34Q96MH7 638 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 HS6ST2Q96MM7 605 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 NUDT22Q9BRQ3 303 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 CINPQ9BW66 212 aaPredicted RBP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 NLRC4Q9NPP4 1024 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 FNIP2Q9P278 1114 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 MAFFQ9ULX9 164 aa3.53□□□□□ -1.84
SCARNA18-201ENST00000459004 SPATA31A1Q5TZJ5 1347 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 CLIC1O00299 241 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 PODXLO00592 558 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 FYB1O15117 783 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 CA12O43570 354 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 PLA2G6O60733 806 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 CBFA2T3O75081 653 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 VIPP01282 170 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 TMIGD3P0DMS9 266 aaPredicted RBP3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 PECAM1P16284 738 aaPredicted RBP3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 EPHB2P29323 1055 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 MPGP29372 298 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 ABCG1P45844 678 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 HSPA7P48741 367 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 GPC5P78333 572 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 NSUN2Q08J23 767 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 HDAC1Q13547 482 aaPredicted RBP3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 AASDHQ4L235 1098 aaPredicted RBP3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 CEP78Q5JTW2 689 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 GRHL2Q6ISB3 625 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 MIS18BP1Q6P0N0 1132 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 ZNF813Q6ZN06 617 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 DCDC5Q6ZRR9 648 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 SYTL1Q8IYJ3 562 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 GALNT16Q8N428 558 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 OVCA2Q8WZ82 227 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 GRAMD1AQ96CP6 724 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 STK33Q9BYT3 514 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 TMEM8AQ9HCN3 771 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 NECTIN3Q9NQS3 549 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 CHST12Q9NRB3 414 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 VPS45Q9NRW7 570 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 SEMA5BQ9P283 1151 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 CA14Q9ULX7 337 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 PCDHGB2Q9Y5G2 931 aa3.52□□□□□ -1.85
SCARNA18-201ENST00000459004 WDR17Q8IZU2 1322 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 PRR35P0CG20 571 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 SRGAP2BP0DMP2 458 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 CDK4P11802 303 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 ABCB4P21439 1286 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 MMP8P22894 467 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 KELP23276 732 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 SSBP2P81877 361 aaPredicted RBP3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 SEMA3BQ13214 749 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 KCNB1Q14721 858 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 EZH2Q15910 746 aaKnown RBP3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 ARHGAP15Q53QZ3 475 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 TMEM196Q5HYL7 178 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 TMTC4Q5T4D3 741 aa3.51□□□□□ -1.85
SCARNA18-201ENST00000459004 SYCP2LQ5T4T6 812 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms