RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ITPR1Q14643 2758 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 NBEAQ8NFP9 2946 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 PRRT4C9JH25 899 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 NEDD8-MDP1E9PL57 170 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 CAPNS1P04632 268 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 RPN1P04843 607 aaKnown RBP11.01□□□□□ -0.65
HDLBP-227ENST00000458564 CCDC130P13994 396 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 ATP5C1P36542 298 aaKnown RBP11.01□□□□□ -0.65
HDLBP-227ENST00000458564 ZNF132P52740 706 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 FAM193AP78312 1265 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 ZACNQ401N2 412 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 SDE2Q6IQ49 451 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 SCARA5Q6ZMJ2 495 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 Q6ZNB5 142 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 METTL3Q86U44 580 aaKnown RBP11.01□□□□□ -0.65
HDLBP-227ENST00000458564 ZNF276Q8N554 614 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 TRIML1Q8N9V2 468 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 SLC2A14Q8TDB8 520 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 TAF4BQ92750 862 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 FOXJ1Q92949 421 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 MRGPRX1Q96LB2 322 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 OSER1Q9NX31 292 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 HMGXB4Q9UGU5 601 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 LSM7Q9UK45 103 aaKnown RBP11.01□□□□□ -0.65
HDLBP-227ENST00000458564 FBXO10Q9UK96 956 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 CYP8B1Q9UNU6 501 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 PCDHA5Q9Y5H7 936 aa11.01□□□□□ -0.65
HDLBP-227ENST00000458564 HHLA1C9JL84 531 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 NPC1O15118 1278 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 POLR2DO15514 142 aaKnown RBP11□□□□□ -0.65
HDLBP-227ENST00000458564 TBX18O95935 607 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 ASS1P00966 412 aaKnown RBP11□□□□□ -0.65
HDLBP-227ENST00000458564 CISD3P0C7P0 127 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 FAM200BP0CF97 657 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 WASP42768 502 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 ASPAP45381 313 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 DGKGP49619 791 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 NDST1P52848 882 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 MAP3K7CLP57077 242 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 INCA1Q0VD86 236 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 ENPP2Q13822 863 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 SGSM1Q2NKQ1 1148 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 SYCP2LQ5T4T6 812 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 CLEC20AQ6ZU45 233 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 TOGARAM2Q6ZUX3 1019 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 GPRIN1Q7Z2K8 1008 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 DEFB119Q8N690 84 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 DNASE2BQ8WZ79 361 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 ZNF396Q96N95 335 aaPredicted RBP11□□□□□ -0.65
HDLBP-227ENST00000458564 HNRNPABQ99729 332 aaKnown RBP11□□□□□ -0.65
HDLBP-227ENST00000458564 BACH2Q9BYV9 841 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 ZDHHC5Q9C0B5 715 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 SLC39A2Q9NP94 309 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11□□□□□ -0.65
HDLBP-227ENST00000458564 CACNA2D2Q9NY47 1150 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 USP36Q9P275 1121 aaKnown RBP11□□□□□ -0.65
HDLBP-227ENST00000458564 SLC27A6Q9Y2P4 619 aa11□□□□□ -0.65
HDLBP-227ENST00000458564 CEP192Q8TEP8 1941 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 IKBKBO14920 756 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 CYP26A1O43174 497 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 PENKP01210 267 aaPredicted RBP10.99□□□□□ -0.65
HDLBP-227ENST00000458564 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
HDLBP-227ENST00000458564 GNSP15586 552 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 TRIM21P19474 475 aaKnown RBP10.99□□□□□ -0.65
HDLBP-227ENST00000458564 CASP1P29466 404 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 PLA2G4AP47712 749 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 RING1Q06587 406 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 CUL4BQ13620 913 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 COL9A2Q14055 689 aaPredicted RBP10.99□□□□□ -0.65
HDLBP-227ENST00000458564 PLEKHG6Q3KR16 790 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 WDR45BQ5MNZ6 344 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 LRSAM1Q6UWE0 723 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 TPGS1Q6ZTW0 290 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 CCDC186Q7Z3E2 898 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 PROSER1Q86XN7 944 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 CHCHD4Q8N4Q1 142 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 OR2I1PQ8NGU4 316 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 ADAMTS14Q8WXS8 1223 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 BLZF1Q9H2G9 400 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 KCTD10Q9H3F6 313 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 NMUR1Q9HB89 426 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 CD93Q9NPY3 652 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 FAM49BQ9NUQ9 324 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 DNMT3LQ9UJW3 386 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 RAD54BQ9Y620 910 aa10.99□□□□□ -0.65
HDLBP-227ENST00000458564 ADAMTS9Q9P2N4 1935 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 PDXKO00764 312 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 KLRC4O43908 158 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 SH3BP5O60239 455 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 CBFA2T3O75081 653 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 NDUFS2O75306 463 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 STC2O76061 302 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 CLSTN1O94985 981 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 IGLV3-19P01714 112 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 ACO1P21399 889 aaKnown RBP10.98□□□□□ -0.65
HDLBP-227ENST00000458564 CD6P30203 668 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 PSEN1P49768 467 aa10.98□□□□□ -0.65
HDLBP-227ENST00000458564 KIF11P52732 1056 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms