RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 KRT13P13646 458 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 TRIM21P19474 475 aaKnown RBP11.87□□□□□ -0.51
RPSA-204ENST00000458478 RPL13P26373 211 aaKnown RBP11.87□□□□□ -0.51
RPSA-204ENST00000458478 SHC2P98077 582 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 ENPEPQ07075 957 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 ZNF394Q53GI3 561 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 SPDYCQ5MJ68 293 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 EGFLAMQ63HQ2 1017 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 GRAMD4Q6IC98 578 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 KLHDC10Q6PID8 442 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 TOGARAM2Q6ZUX3 1019 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 ARMCX6Q7L4S7 300 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 ZNF276Q8N554 614 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 DEFB119Q8N690 84 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 SEMA4DQ92854 862 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 EEF2KMTQ96G04 330 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 P2RY11Q96G91 374 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 SPACA7Q96KW9 195 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 HEXIM2Q96MH2 286 aaKnown RBP11.87□□□□□ -0.51
RPSA-204ENST00000458478 XPO6Q96QU8 1125 aaKnown RBP11.87□□□□□ -0.51
RPSA-204ENST00000458478 DUSP16Q9BY84 665 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 NIF3L1Q9GZT8 377 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 GOLPH3LQ9H4A5 285 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 TMEM8AQ9HCN3 771 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 MARK1Q9P0L2 795 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 EVLQ9UI08 416 aaPredicted RBP11.87□□□□□ -0.51
RPSA-204ENST00000458478 DNMT3LQ9UJW3 386 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 LSM7Q9UK45 103 aaKnown RBP11.87□□□□□ -0.51
RPSA-204ENST00000458478 USP3Q9Y6I4 520 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
RPSA-204ENST00000458478 GON4LQ3T8J9 2241 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 A0A1W2PQD8 194 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 ZNF202O95125 648 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 HOXB2P14652 356 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 ITPKAP23677 461 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 GTF2H1P32780 548 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 NOVA1P51513 510 aaKnown RBP11.86□□□□□ -0.51
RPSA-204ENST00000458478 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 UAP1L1Q3KQV9 507 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 ZCWPW2Q504Y3 356 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 TRIM61Q5EBN2 209 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 C10orf120Q5SQS8 335 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 SH3PXD2AQ5TCZ1 1133 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 KRT39Q6A163 491 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 SDE2Q6IQ49 451 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 KIAA1211LQ6NV74 962 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 Q6ZNB5 142 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 CCDC186Q7Z3E2 898 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 SYT12Q8IV01 421 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 CHPFQ8IZ52 775 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 ERLEC1Q96DZ1 483 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 PLK2Q9NYY3 685 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 NAGPAQ9UK23 515 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 FBXO10Q9UK96 956 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 PILRBQ9UKJ0 227 aa11.86□□□□□ -0.51
RPSA-204ENST00000458478 TNRC6BQ9UPQ9 1833 aaKnown RBP11.86□□□□□ -0.51
RPSA-204ENST00000458478 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
RPSA-204ENST00000458478 WASH3PC4AMC7 463 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 STC2O76061 302 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 KLKB1P03952 638 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 RALAP11233 206 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 DGKGP49619 791 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 PSEN1P49768 467 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 RAD23BP54727 409 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 LMAN2Q12907 356 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 LYSMD4Q5XG99 296 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 SLC23A3Q6PIS1 610 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 SMYD4Q8IYR2 804 aaPredicted RBP11.85□□□□□ -0.51
RPSA-204ENST00000458478 SLC4A11Q8NBS3 891 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 CCDC150Q8NCX0 1101 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 IPO4Q8TEX9 1081 aaKnown RBP11.85□□□□□ -0.51
RPSA-204ENST00000458478 TATDN2Q93075 761 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 BHMTQ93088 406 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 TMEM176AQ96HP8 235 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 GABRG3Q99928 467 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 NUSAP1Q9BXS6 441 aaKnown RBP11.85□□□□□ -0.51
RPSA-204ENST00000458478 UBXN6Q9BZV1 441 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
RPSA-204ENST00000458478 CISHQ9NSE2 258 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 RAB20Q9NX57 234 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 CLIC5Q9NZA1 410 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 CALCOCO1Q9P1Z2 691 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 RAD54BQ9Y620 910 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 CEP192Q8TEP8 1941 aa11.85□□□□□ -0.51
RPSA-204ENST00000458478 ATXN2Q99700 1313 aaKnown RBP11.85□□□□□ -0.51
RPSA-204ENST00000458478 ASPMQ8IZT6 3477 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 PLXND1Q9Y4D7 1925 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 IGHV1OR15-9A0A0B4J2B8 117 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 AP5Z1O43299 807 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 HMBSP08397 361 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 CEACAM1P13688 526 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 ENGP17813 658 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 NDUFV2P19404 249 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 CSRP1P21291 193 aaKnown RBP11.84□□□□□ -0.51
RPSA-204ENST00000458478 MAPK8P45983 427 aa11.84□□□□□ -0.51
RPSA-204ENST00000458478 RPL6Q02878 288 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms