RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 ZBED3Q96IU2 234 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 C10orf88Q9H8K7 445 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 RSAD1Q9HA92 442 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 PAPOLBQ9NRJ5 636 aaKnown RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 HECAQ9UBI9 543 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 FAM47DPA6NHR8 397 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 NCAM2O15394 837 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 DKC1O60832 514 aaKnown RBP eCLIP12.25□□□□□ -0.45
SYNE2-207ENST00000458046 BANF1O75531 89 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 PIAS1O75925 651 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 MT-ND3P03897 115 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 KRT15P19012 456 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 GLRA2P23416 452 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 GCAP28676 217 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 CETN2P41208 172 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 DDR2Q16832 855 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 XKR3Q5GH77 459 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 PRAMEF18Q5VWM3 479 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 FNIP1Q8TF40 1166 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 NINJ1Q92982 152 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 HLA-CQ95604 372 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 MCEEQ96PE7 176 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 SLITRK1Q96PX8 696 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 FAM129BQ96TA1 746 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 VPS37BQ9H9H4 285 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 FBRSQ9HAH7 460 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 RXFP1Q9HBX9 757 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 TRPV5Q9NQA5 729 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 SAE1Q9UBE0 346 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-207ENST00000458046 A0A1W2PPC1 479 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 M0QX08 132 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 DNALI1O14645 258 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-207ENST00000458046 CD46P15529 392 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 NPR3P17342 541 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 MTHFRP42898 656 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 RTP1P59025 263 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 IL9RQ01113 521 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 MTM1Q13496 603 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF268Q14587 947 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-207ENST00000458046 DCUN1D2Q6PH85 259 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 PPP1R21Q6ZMI0 780 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 TRIM72Q6ZMU5 477 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 RAPH1Q70E73 1250 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 ERMP1Q7Z2K6 904 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 ECHDC2Q86YB7 292 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 RCOR2Q8IZ40 523 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 AGAP11Q8TF27 550 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 VCPIP1Q96JH7 1222 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 CFAP57Q96MR6 1250 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 TMEM121Q9BTD3 319 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 SLCO1B3Q9NPD5 702 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 EPS15L1Q9UBC2 864 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 TTLL3Q9Y4R7 772 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 TRIM17Q9Y577 477 aa12.25□□□□□ -0.45
SYNE2-207ENST00000458046 TMEM191CA6NGB0 347 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 GNRH1P01148 92 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 TMEM191BP0C7N4 346 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 DPEP1P16444 411 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 TPD52P55327 224 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 SARNPP82979 210 aaKnown RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 OGDHQ02218 1023 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF252P-AS1Q0IIN9 211 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 MTFR1Q15390 333 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 INTS11Q5TA45 600 aaKnown RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 NBPF12Q5TAG4 269 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 RETSATQ6NUM9 610 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 DSTYKQ6XUX3 929 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 SDCCAG8Q86SQ7 713 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 ZBTB33Q86T24 672 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 ZBED8Q8IZ13 594 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 KIRREL3Q8IZU9 778 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 GBP7Q8N8V2 638 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 EURLQ9NYK6 297 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 LRRC72A6NJI9 287 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 CLASP2O75122 1294 aaKnown RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 TJP3O95049 919 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 MMP8P22894 467 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 ELF1P32519 619 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 TNFSF9P41273 254 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 HMGCS2P54868 508 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 DYNLT1P63172 113 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 GUCA2AQ02747 115 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 MYO1EQ12965 1108 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 PPA1Q15181 289 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 CYP4A22Q5TCH4 519 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 TRABD2AQ86V40 505 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 TBC1D21Q8IYX1 336 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 ANKLE1Q8NAG6 615 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 KCTD13Q8WZ19 329 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 HHIPL1Q96JK4 782 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 CLMNQ96JQ2 1002 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 CNDP1Q96KN2 507 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 TRABDQ9H4I3 376 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 CRYL1Q9Y2S2 319 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 STYXL1Q9Y6J8 313 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 C17orf113A0A1B0GUU1 675 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 A0A1W2PPM1 405 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 LRRD1A4D1F6 860 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms