RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PRR18Q8N4B5 295 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 SLC16A11Q8NCK7 471 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 KREMEN2Q8NCW0 462 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 CCDC150Q8NCX0 1101 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 ZMIZ2Q8NF64 920 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 OR56B2PQ8NGI1 322 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 FAM81AQ8TBF8 368 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 TRPC4APQ8TEL6 797 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 ZNF483Q8TF39 744 aaPredicted RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 KISS1RQ969F8 398 aaPredicted RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 SGK3Q96BR1 496 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 NUDCD1Q96RS6 583 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 FNBP1Q96RU3 617 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 ORAI2Q96SN7 254 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 TBCBQ99426 244 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 COQ7Q99807 217 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 STK31Q9BXU1 1019 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 GCOM2Q9BZD3 368 aaPredicted RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 ARHGAP39Q9C0H5 1083 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 NYXQ9GZU5 481 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 TMEM168Q9H0V1 697 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 TTC12Q9H892 705 aaPredicted RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 CCDC177Q9NQR7 707 aaPredicted RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 GLRX2Q9NS18 164 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 HAUS2Q9NVX0 235 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 ADPRHL2Q9NX46 363 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 PPP4R1LQ9P1A2 415 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 ORC3Q9UBD5 711 aaPredicted RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 TBC1D29Q9UFV1 150 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 FBXO40Q9UH90 709 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 VPS28Q9UK41 221 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 SLC13A4Q9UKG4 626 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 EXOC7Q9UPT5 735 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 TMEM5Q9Y2B1 443 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 PCDHA2Q9Y5H9 948 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS41-209ENST00000457055 ZBED9Q6R2W3 1325 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.71□□□□□ -1.49
VPS41-209ENST00000457055 EFCAB6Q5THR3 1501 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TCRBV5S2A0A599 114 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SLC12A8A0AV02 714 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ARHGAP10A1A4S6 786 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 PGPEP1LA6NFU8 196 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 STX16-NPEPL1H3BU86 382 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 K7EPI3 171 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 PDLIM1O00151 329 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 APOL1O14791 398 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 NVLO15381 856 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 TEX28O15482 410 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 DOK2O60496 412 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CYP7B1O75881 506 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SLU7O95391 586 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 GJB6O95452 261 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 PLGP00747 810 aaPredicted RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 POLBP06746 335 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ASGR1P07306 291 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SNRNP70P08621 437 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 POU2F2P09086 479 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TROVE2P10155 538 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS41-209ENST00000457055 COL6A2P12110 1019 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 HPGDP15428 266 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 HSPA6P17066 643 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 IL10P22301 178 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CTNNA2P26232 953 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CNTFP26441 200 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 RPL9P32969 192 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 IL13P35225 146 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 PPM1AP35813 382 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 LTBRP36941 435 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 RECQLP46063 649 aaPredicted RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 RNASE9P60153 205 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 TGFB2P61812 414 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 RPP38P78345 283 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 AIMP1Q12904 312 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 LSAMPQ13449 338 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CUL4AQ13619 759 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TESK1Q15569 626 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SNCBQ16143 134 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ZNF674Q2M3X9 581 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SLC10A6Q3KNW5 377 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 FUT11Q495W5 492 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TDRD12Q587J7 1177 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 EMC4Q5J8M3 183 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CEP78Q5JTW2 689 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ADALQ6DHV7 355 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 PM20D1Q6GTS8 502 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 TEPPQ6URK8 271 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SASS6Q6UVJ0 657 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 ZYG11AQ6WRX3 759 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 C15orf52Q6ZUT6 534 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 MRPL10Q7Z7H8 261 aaKnown RBP5.71□□□□□ -1.5
VPS41-209ENST00000457055 TMTC1Q8IUR5 882 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 GRAMD2AQ8IUY3 354 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 UNC5CLQ8IV45 518 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 SPARTQ8N0X7 666 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 LSMEM2Q8N112 164 aa5.71□□□□□ -1.5
VPS41-209ENST00000457055 CNTROBQ8N137 903 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms